Job Description P29208 Confidence 100.00% Date Thu Jan 5 11:45:36 GMT 2012 Rank 123 Aligned Residues 281 % Identity 17% Template c3qn3B_ PDB info PDB header:lyase Chain: B: PDB Molecule:enolase; PDBTitle: phosphopyruvate hydratase from campylobacter jejuni. Resolution 2.13 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.																.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																																				.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	S	A	Q	V	Y	R	W	Q	I	P	M	D	A	G	V	V	L	R	D	R	R	L	K	T	R	D	G	L	Y	V	C	L	.	R	E	G	E	R	E	G	W	G	E	I	S	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	F	S	Q	E	T	W	E	E	A	Q	S	V	L	L
Query Conservation																																				.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.							.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	D	V	R	A	Y	E	V	L	D	S	R	G	N	P	.	.	.	.	.	.	.	.	.	.	.	.	T	V	K	A	E	V	T	L	S	D	G	S	V	G	A	A	I	V	P	S	G	A	S	T	G	S	K	E	A	L	E	L	R	D	N	D	E	R	F	G	G	K	G	V	L	K	A	V	A	N	V	N
Template Known Secondary structure													T	T	S			.	.	.	.	.	.	.	.	.	.	.	.									T	T	S												S	S		S	S	S								S	T	G	G	G	G	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.													20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.																				.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	W	V	N	N	W	L	A	G	D	C	E	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	M	P	S	V	A	F	G	V	S	C	A	L	A	E	L	T	D	T	L	P	Q	A	A	N	Y	R	A	A	P	L	C	N	G	D	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	T	I	A	D	E	I	L	G	L	D	A	F	N	Q	T	Q	L	D	D	T	L	R	E	L	D	G	T	N	N	Y	S	N	L	G	A	N	A	T	L	G	V	S	M	A	T	A	R	A	A	A	A	A	L	G	M	P	L	Y	R	Y	L	G	G	A	N	A	S	I	L	P	V	P	M	C	N	I	I	N	G
Template Known Secondary structure		T							T	T	S	B	T	T															S	S	S		T	T	T																					T										T	T
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
																																		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.																	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.																	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	D	L	I	L	K	L	A	D	M	P	G	E	K	V	A	K	V	K	V	G	L	Y	.	.	E	A	V	R	D	G	M	V	V	N	L	L	L	E	A	I	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.																	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.																	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	H	A	N	N	N	V	D	F	Q	E	F	M	I	M	P	F	G	F	T	S	F	K	E	A	L	R	S	V	C	E	I	Y	A	I	L	K	K	E	L	A	N	S	G	H	S	T	A	L	G	D	E	G	G	F	A	P	N	L	A	N	N	T	E	P	I	D	L	L	M	T	C	I	K	K	A	G	Y	E
Template Known Secondary structure		G	G	G	S	S	S	S				S								S		S	S																						T	T							T	T	S		B					S	S	S	S														T		T
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		154	.	.	.	.	.	160	.	.															.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.				.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																	.	.																			.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																	.	.																			.	.	.
Query Sequence		P	D	L	H	L	R	L	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	A	W	T	P	L	K	G	Q	Q	F	A	K	Y	V	.	N	P	D	Y	R	D	R	I	A	F	L	E	E	P	C	K	.	.	T	R	D	D	S	R	A	F	A	R	E	T	G	I	A	I	A	W	.	.	.	D
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																	.	.																			.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.				.	.	.											.	.																			.	.	.
Template Conservation																																													.	.	.
Template Sequence		N	R	V	K	I	A	L	D	V	A	S	T	E	F	F	K	D	G	K	Y	H	M	E	G	K	A	F	S	S	E	A	L	I	E	R	Y	V	E	L	C	A	K	Y	.	.	.	P	I	C	S	I	E	D	G	L	A	E	N	D	F	E	G	W	I	K	L	T	E	K	L	G	N	K	I	Q	L	V	G	D	D
Template Known Secondary structure		T	T									G	G	G	G			T	T					T	T																			S	.	.	.							S	S	S		T	T													T	T	T	S					S	T
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.				.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure												.	.																																											.
Query SS confidence												.	.																																											.
Query Sequence		E	S	L	R	E	P	D	F	A	F	.	.	V	A	E	E	G	V	R	A	V	V	I	K	P	T	L	T	G	S	L	E	K	V	R	E	Q	V	Q	A	A	H	A	L	G	L	T	A	V	I	S	S	S	I	.	E	S	S	L	G	L	T	Q	L	A	R	I	A	A	W	L	T	P	D	T	I	P	G	L	D
Query Conservation												.	.																																											.
Alig confidence												.	.																																											.
Template Conservation
Template Sequence		L	F	V	T	N	E	D	I	L	R	E	G	I	I	K	K	M	A	N	A	V	L	I	K	P	N	Q	I	G	T	I	T	Q	T	M	R	T	V	R	L	A	Q	R	N	N	Y	K	C	V	M	S	H	R	S	G	E	S	E	D	A	F	I	A	D	F	A	V	A	L	N	T	G	Q	I	K	T	G	A	L	A
Template Known Secondary structure		T	T	T	T											T	T			S											S														T	T									S	S			S											T	T		S							S
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
		291	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	D	L	M	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	E	R	T	A
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		389	390	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions