Return to main results Retrieve Phyre Job Id

Job DescriptionP29208
Confidence96.56%DateThu Jan 5 11:45:36 GMT 2012
Rank155Aligned Residues116
% Identity16%Templatec3noyA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PDBTitle: crystal structure of ispg (gcpe)
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   152.......160.........170.........180.........190........ .200.........210.........220........
Predicted Secondary structure 





















...












Query SS confidence 














































. . .





























Query Sequence  AIPDLHLRLDANRAWTPLKGQQFAKYVNPDYRDRIAFLEEPCKTRDD. . . SRAFARETGIAIAWDESLREPDFAFVAEEG
Query Conservation     
  
 



  
    
      
       
   
 
      ...   
      


 


             
Alig confidence 














































...





























Template Conservation 


  

 




 
 
 
  
 
 

  
  

 




 
     
  
  
     








    
  
    
Template Sequence  IGGDAPIVVQSMTSTKTHDVEATLNQIKRLYEAGCEIVRVAVPHKEDVEALEEIVKKSPMPVIADIHFAPSYAFLSMEKG
Template Known Secondary structure  STTS



S
TT
TT



S
SS


S
TT
Template Predicted Secondary structure 


























Template SS confidence 















































































   17..20.........30.........40.........50.........60.........70.........80.........90......
 
   229230.........240.........250.........260.......
Predicted Secondary structure 

















Query SS confidence 






































Query Sequence  VRAVVIKPTLTGSLEKVREQVQAAHALGLTAVISSSIES
Query Conservation   
 
 

    


  
      
   

   

   

Alig confidence 






































Template Conservation    








   
    

  

     





 

Template Sequence  VHGIRINPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGS
Template Known Secondary structure 
S
S
T
GGG
Template Predicted Secondary structure 

















Template SS confidence 






































   97..100.........110.........120.........130.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions