Job Description P29208 Confidence 100.00% Date Thu Jan 5 11:45:36 GMT 2012 Rank 41 Aligned Residues 296 % Identity 20% Template c3my9A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:muconate cycloisomerase; PDBTitle: crystal structure of a muconate cycloisomerase from azorhizobium2 caulinodans Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																				.																																											.	.	.
Query SS confidence																																				.																																											.	.	.
Query Sequence		M	R	S	A	Q	V	Y	R	W	Q	I	P	M	D	A	G	V	V	L	R	D	R	R	L	K	T	R	D	G	L	Y	V	C	L	.	R	E	G	E	R	E	G	W	G	E	I	S	P	L	P	G	F	S	Q	E	T	W	E	E	A	Q	S	V	L	L	A	W	V	N	N	W	L	A	G	D	C	E	.	.	.
Query Conservation																																				.																																											.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.									.																	.	.	.	.	.	.																					.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Sequence		V	E	R	I	R	I	F	L	V	E	S	P	I	K	M	G	S	.	.	.	.	.	.	.	.	.	V	K	R	V	L	L	E	V	T	S	A	D	G	I	V	G	W	G	E	A	A	P	W	T	P	.	.	.	.	.	.	E	A	A	F	S	A	L	D	I	Y	L	R	P	L	I	L	G	A	P	I	K	R	V
Template Known Secondary structure																			.	.	.	.	.	.	.	.	.											T	T	S													.	.	.	.	.	.									T	T	T					T	T		B	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.										.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.							.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
												77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.													.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	L	P	Q	M	P	S	V	A	F	G	V	S	C	A	L	A	E	L	T	D	T	L	P	Q	A	A	N	Y	R	A	A	P	.	.	.	.	.	.	.	.	.	.	.	.	L	C	N	G	D	P	D	D	L	I	L	K	L	A	D	.	.	M	P	G	E	K	V	A	K	V
Query Conservation		.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		R	E	L	M	A	R	M	D	K	M	L	V	G	H	G	E	A	K	A	A	V	E	M	A	L	L	D	I	L	G	K	A	T	G	L	S	V	A	D	L	L	G	G	R	V	R	D	R	I	P	L	S	F	S	I	A	D	P	D	F	D	A	D	L	E	R	M	R	A	M	V	P	A	G	H	T	V	F	K	M
Template Known Secondary structure												S		S																					T		B	T	T	G	G	G	T			S		S				B							S	S												T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.																																													.	.
Query SS confidence																					.																																													.	.
Query Sequence		K	V	G	L	Y	E	A	V	R	D	G	M	V	V	N	L	L	L	E	.	A	I	P	D	L	H	L	R	L	D	A	N	R	A	W	T	P	L	K	G	Q	Q	F	A	K	Y	V	N	P	D	Y	R	D	R	I	A	F	L	E	E	P	C	K	T	.	.	R	D	D	S	R	A	F	A	R	E	T	G	I	A
Query Conservation																					.																																													.	.
Alig confidence																					.																															.	.	.												.	.
Template Conservation																																																				.	.	.
Template Sequence		K	T	G	V	K	P	H	A	E	E	L	R	I	L	E	T	M	R	G	E	F	G	E	R	I	D	L	R	L	D	F	N	Q	A	L	T	P	F	G	A	M	K	I	L	R	D	V	D	A	F	.	.	.	R	P	T	F	I	E	Q	P	V	P	R	R	H	L	D	A	M	A	G	F	A	A	A	L	D	T	P
Template Known Secondary structure				S	S	S																	G	G	G	S							T	T				T	T	T										T	T	.	.	.			S						S		T	T													S	S
Template Predicted Secondary structure																																																				.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		I	A	W	D	E	S	L	R	E	P	D	F	A	.	.	F	V	A	E	E	G	V	R	A	V	V	I	K	P	T	L	T	G	S	L	E	K	V	R	E	Q	V	Q	A	A	H	A	L	G	L	T	A	V	I	S	S	S	I	E	S	S	L	G	L	T	Q	L	A	R	I	A	A	W	L	T	P	D	T	I	P
Query Conservation															.	.
Alig confidence															.	.
Template Conservation
Template Sequence		I	L	A	D	E	S	C	F	D	A	V	D	L	M	E	V	V	R	R	Q	A	A	D	A	I	S	V	K	I	M	K	C	G	G	L	M	K	A	Q	S	L	M	A	I	A	D	T	A	G	L	P	G	Y	G	G	T	L	W	E	G	G	I	A	L	A	A	G	T	Q	L	I	A	A	T	P	G	I	S	L	G
Template Known Secondary structure					S	T	T		S	S											T			S										T	S															T											S													T		T	T	B		S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		288			.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		G	.	.	L	D	T	L	D	L	M	Q	A	Q	Q	V	R	R	W	P	G	S	T	L	P	V	V	E	V	D
Query Conservation			.	.
Alig confidence			.	.
Template Conservation
Template Sequence		C	E	F	Y	M	P	H	H	V	L	T	E	D	V	L	E	E	R	I	A	N	S	A	G	H	V	I	V	P
Template Known Secondary structure		B			S		T	T	S						S	S	S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions