Job Description P29208 Confidence 100.00% Date Thu Jan 5 11:45:36 GMT 2012 Rank 27 Aligned Residues 307 % Identity 21% Template c3mwcA_ PDB info PDB header:ligase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of probable o-succinylbenzoic acid synthetase from2 kosmotoga olearia Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.																													.	.
Query SS confidence																																																		.	.																													.	.
Query Sequence		M	R	S	A	Q	V	Y	R	W	Q	I	P	M	D	A	G	V	V	L	R	D	R	R	L	K	T	R	D	G	L	Y	V	C	L	R	E	G	E	R	E	G	W	G	E	I	S	P	L	.	.	P	G	F	S	Q	E	T	W	E	E	A	Q	S	V	L	L	A	W	V	N	N	W	L	A	G	D	C	E	.	.
Query Conservation																																																		.	.																													.	.
Alig confidence																																																		.	.																													.	.
Template Conservation
Template Sequence		I	D	G	V	S	L	Y	E	I	V	I	P	M	K	I	P	F	Q	I	S	S	G	T	C	Y	T	R	R	S	L	V	V	E	I	R	E	G	D	L	F	G	Y	G	E	S	A	P	F	E	E	P	F	Y	L	G	E	T	L	E	T	T	K	V	I	L	K	N	H	L	L	P	M	I	L	G	K	E	P	L	S
Template Known Secondary structure															S	S				B	T	T	B															T	T										B	S	S	T	T	S	T	T		B											T						T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
													77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																												.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	L	P	Q	M	P	S	V	A	F	G	V	S	C	A	L	A	E	L	T	D	T	L	P	Q	A	A	N	Y	R	A	A	P	L	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	D	P	D	D	L	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	E	F	N	H	L	I	K	N	G	I	R	G	N	H	F	A	R	C	G	V	E	N	A	Y	W	D	L	I	A	K	K	N	K	I	S	L	K	A	M	I	E	K	K	M	K	N	L	G	V	K	Q	E	Y	L	A	S	N	N	Y	I	E	S	G	A	A	L	G	I	P	E	D	G	R	I	E	T	L	I
Template Known Secondary structure												S			S																				T	T		B												T	T			G	G	G	G		B		S				B								T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		119	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure							.	.																													.																																												.
Query SS confidence							.	.																													.																																												.
Query Sequence		L	K	L	A	D	.	.	M	P	G	E	K	V	A	K	V	K	V	G	L	Y	E	A	V	R	D	G	M	V	V	N	L	L	L	E	.	A	I	P	D	L	H	L	R	L	D	A	N	R	A	W	T	P	L	K	G	Q	Q	F	A	K	Y	V	N	P	D	Y	R	D	R	I	A	F	L	E	E	P	C	K	.
Query Conservation							.	.																													.																																												.
Alig confidence							.	.													.	.	.														.																		.													.	.	.											.
Template Conservation																					.	.	.																																.													.	.	.
Template Sequence		H	Q	V	E	E	S	L	Q	E	G	Y	R	R	I	K	I	K	I	K	.	.	.	P	G	W	D	V	E	P	L	Q	E	T	R	R	A	V	G	D	H	F	P	L	W	T	D	A	N	S	S	F	E	L	.	D	Q	W	E	T	F	K	A	M	D	A	A	.	.	.	K	C	L	F	H	E	Q	P	L	H	Y
Template Known Secondary structure											T		S							B	.	.	.	T	T	B	S													T	T	S							T	T				G	.	G	G								G	G	G	.	.	.			S				S		S		T
Template Predicted Secondary structure																					.	.	.																																.													.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.				230	.	.	.	.	.	.	.	.	.	240
			195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure		.																													.	.
Query SS confidence		.																													.	.
Query Sequence		.	T	R	D	D	S	R	A	F	A	R	E	T	G	I	A	I	A	W	D	E	S	L	R	E	P	D	F	A	.	.	F	V	A	E	E	G	V	R	A	V	V	I	K	P	T	L	T	G	S	L	E	K	V	R	E	Q	V	Q	A	A	H	A	L	G	L	T	A	V	I	S	S	S	I	E	S	S	L	G	L
Query Conservation		.																													.	.
Alig confidence		.																													.	.
Template Conservation
Template Sequence		E	A	L	L	D	L	K	E	L	G	E	R	I	E	T	P	I	C	L	D	E	S	L	I	S	S	R	V	A	E	F	V	A	K	L	G	I	S	N	I	W	N	I	K	I	Q	R	V	G	G	L	L	E	A	I	K	I	Y	K	I	A	T	D	N	G	I	K	L	W	G	G	T	M	P	E	S	G	L	G	A
Template Known Secondary structure		T												S	S	S					S	T	T			S										T	T			S										T	S														T	T								S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		T	Q	L	A	R	I	A	A	W	L	T	P	D	T	I	P	G	L	D	.	T	L	D	L	M	Q	A	Q	Q	V	R	R	W	P	G	S	T	L	P	V	V	E	V	D
Query Conservation																					.
Alig confidence																					.
Template Conservation
Template Sequence		R	F	L	I	S	L	A	S	F	R	G	F	V	F	P	A	D	V	A	A	S	E	K	W	Y	G	K	G	N	D	L	V	E	N	T	M	T	D	G	K	I	Y	V	P
Template Known Secondary structure								T	T	B	T	T	B		S		B											T	T	T	S	S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions