Job Description P29208 Confidence 100.00% Date Thu Jan 5 11:45:36 GMT 2012 Rank 65 Aligned Residues 297 % Identity 12% Template c3msyC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme2 from a marine actinobacterium Resolution 2.50 Å

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		11	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.																	.	.	.	.	.	.	70	.	.
Predicted Secondary structure													.														.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.														.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	P	M	D	A	G	V	V	L	R	D	.	R	R	L	K	T	R	D	G	L	Y	V	C	L	.	R	E	G	E	R	E	G	W	G	E	I	S	P	L	P	G	F	S	Q	E	T	W	E	E	A	Q	S	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	W	V	N	N	W	L	A
Query Conservation													.														.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.														.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	P	X	V	A	P	L	A	R	E	F	R	G	S	H	T	H	R	A	T	I	V	T	R	V	H	T	D	A	G	I	I	G	E	A	Y	T	G	D	E	H	E	T	X	F	D	I	D	R	I	I	H	E	E	L	A	P	T	L	I	G	Q	D	A	X	A	I	E	R	L	W	D	S	G	Y	K	V	T	F	D
Template Known Secondary structure			B																										S	S	S											S	S	S												T	G	G	G	T	T	T	S	B	T	T										G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.														.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		G	D	C	E	L	P	Q	M	P	S	V	A	F	G	V	S	C	A	L	A	E	L	T	D	T	L	P	Q	A	A	N	Y	R	A	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	L	C	N	G	D	P	D	D	L	I	L	K	L	A	D	.	.	M	P	G	E	K	V	A	K	V	K	V	G	L	Y
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		I	L	R	D	R	R	L	G	L	V	A	L	A	A	V	N	T	A	I	W	D	A	V	G	K	A	L	K	X	P	L	W	K	L	W	G	G	Y	R	N	E	L	P	X	I	A	I	G	G	Y	Y	G	E	P	L	G	S	I	A	D	E	X	H	N	Y	Q	E	L	G	L	A	G	V	K	F	K	V	G	G	L
Template Known Secondary structure		S	S	S																								T	T		B					T	T		S		S											T	T		T	T	S												T	T	B								S	S	S
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		138	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																.																																												.	.	.
Query SS confidence																.																																												.	.	.
Query Sequence		E	A	V	R	D	G	M	V	V	N	L	L	L	E	.	A	I	P	D	L	H	L	R	L	D	A	N	R	A	W	T	P	L	K	G	Q	Q	F	A	K	Y	V	N	P	D	Y	R	D	R	I	A	F	L	E	E	P	C	K	.	.	.	T	R	D	D	S	R	A	F	A	R	E	T	G	I	A	I	A	W	D
Query Conservation																.																																												.	.	.
Alig confidence																.																															.	.	.											.	.	.
Template Conservation																																															.	.	.
Template Sequence		S	A	A	E	D	A	A	R	I	T	A	A	R	E	A	A	G	D	D	F	I	I	C	I	D	A	N	Q	G	Y	K	P	A	V	A	V	D	L	S	R	R	I	A	D	L	.	.	.	N	I	R	W	F	E	E	P	V	E	W	H	N	D	K	R	S	X	R	D	V	R	Y	Q	G	S	V	P	V	C	A	G
Template Known Secondary structure																			S	S	S							T	T		B												T	T	T	S	.	.	.							S		B		S	T	T												S	S	S
Template Predicted Secondary structure																																															.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.				.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		E	S	L	R	E	P	D	F	A	.	.	F	V	A	E	E	G	V	R	A	V	V	I	K	P	T	L	T	G	S	L	E	K	V	R	E	Q	V	Q	A	A	H	A	L	G	L	T	A	V	I	S	S	S	I	E	S	S	L	G	L	T	Q	L	A	R	I	A	A	W	L	T	P	D	T	I	P	G	L	D	T
Query Conservation											.	.
Alig confidence											.	.																																																																			.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		Q	T	E	F	S	A	S	G	C	R	D	L	X	E	T	G	A	I	D	V	C	N	F	D	S	S	W	S	G	G	P	T	A	W	L	R	T	A	A	I	A	T	S	Y	D	V	Q	X	G	H	H	E	E	P	Q	V	S	T	H	L	L	A	S	Q	P	H	G	T	I	A	E	C	F	H	P	D	R	.	.	.
Template Known Secondary structure		T	T		S	S											T			S						G	G	G	T	T															T	T							S												S	T	T	B								T	T	T	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	L	M	Q	A	Q	Q	V	R	R	W	P	G	S	T	L	P	V	V	E	V	D
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	D	P	F	W	W	N	X	I	T	N	R	P	K	L	N	N	G	T	L	T	L	S
Template Known Secondary structure		.								B	S	S					B	T	B
Template Predicted Secondary structure		.
Template SS confidence
			345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions