Job Description P29208 Confidence 100.00% Date Thu Jan 5 11:45:36 GMT 2012 Rank 30 Aligned Residues 295 % Identity 20% Template c3ijlA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:muconate cycloisomerase; PDBTitle: structure of dipeptide epimerase from bacteroides thetaiotaomicron2 complexed with l-pro-d-glu; nonproductive substrate binding. Resolution 1.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		S	A	Q	V	Y	R	W	Q	I	P	M	D	A	G	V	V	L	R	D	R	R	L	K	T	R	D	G	L	Y	V	C	L	R	E	G	E	R	E	G	W	G	E	I	S	P	L	P	G	F	S	Q	E	T	W	E	E	A	Q	S	V	L	L	A	W	V	N	N	W	L	A	G	D	C	E	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																																																	.																											.	.	.	.	.	.
Template Conservation																																																	.
Template Sequence		K	M	T	F	F	P	Y	E	L	K	L	R	H	V	F	T	V	A	T	Y	S	R	T	T	T	P	D	V	Q	V	E	I	E	Y	E	G	V	T	G	Y	G	E	A	S	M	P	P	.	Y	L	G	E	T	V	E	S	V	M	N	F	L	K	K	V	N	L	E	Q	F	S	D	P	F	Q	L	E	D	I	L	S
Template Known Secondary structure																			T	T																T	T											G	.	G	G	S											T	T				T	T				T	T
Template Predicted Secondary structure																																																	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
							77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.													.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.																.
Query SS confidence		.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.																.
Query Sequence		.	.	.	.	.	L	P	Q	M	P	S	V	A	F	G	V	S	C	A	L	A	E	L	T	D	T	L	P	Q	A	A	N	Y	R	A	A	P	.	.	.	.	.	.	.	.	.	.	.	.	L	C	N	G	D	P	D	D	L	I	L	K	L	A	D	.	M	P	G	E	K	V	A	K	V	K	V	G	L	Y	E
Query Conservation		.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.																.
Alig confidence		.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		Y	V	D	S	L	S	P	K	D	T	A	A	K	A	A	V	D	I	A	L	H	D	L	V	G	K	L	L	G	A	P	W	Y	K	I	W	G	L	N	K	E	K	T	P	S	T	T	F	T	I	G	I	D	T	P	D	V	V	R	A	K	T	K	E	C	A	G	L	F	N	I	L	K	V	K	L	G	R	D	N
Template Known Secondary structure						T		S																						T	S	B					T	T			G	G	G			B	B			B																		T	T		S	S						S	S	S
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																															.																											.	.
Query SS confidence																															.																											.	.
Query Sequence		A	V	R	D	G	M	V	V	N	L	L	L	E	A	I	P	D	L	H	L	R	L	D	A	N	R	A	W	T	.	P	L	K	G	Q	Q	F	A	K	Y	V	N	P	D	Y	R	D	R	I	A	F	L	E	E	P	C	.	.	K	T	R	D	D	S	R	A	F	A	R	E	T	G	I	A	I	A	W	D	E	S
Query Conservation																															.																											.	.
Alig confidence		.	.	.												.															.															.	.	.										.	.
Template Conservation		.	.	.												.																														.	.	.
Template Sequence		.	.	.	D	K	E	M	I	E	T	I	R	S	V	.	T	D	L	P	I	A	V	D	A	N	Q	G	W	K	D	R	Q	Y	A	L	D	M	I	H	W	L	K	E	K	.	.	.	G	I	V	M	I	E	Q	P	M	P	K	E	Q	L	D	D	I	A	W	V	T	Q	Q	S	P	L	P	V	F	A	D	E	S
Template Known Secondary structure		.	.	.										T	T	.										T	T																		T	.	.	.	T								S		T	T											T		S	S					S	T	T
Template Predicted Secondary structure		.	.	.												.																														.	.	.
Template SS confidence
					206	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	E	P	D	F	A	F	V	A	E	E	G	V	R	A	V	V	I	K	P	T	L	T	G	S	L	E	K	V	R	E	Q	V	Q	A	A	H	A	L	G	L	T	A	V	I	S	S	S	I	E	S	S	L	G	L	T	Q	L	A	R	I	A	A	W	L	T	P	D	T	I	P	G	L	D	T	L	D	L	M
Query Conservation
Alig confidence																																																																					.	.	.
Template Conservation																																																																					.	.	.
Template Sequence		L	Q	R	L	G	D	V	A	A	L	K	G	A	F	T	G	I	N	I	K	L	M	K	C	T	G	M	R	E	A	W	K	M	V	T	L	A	H	A	L	G	M	R	V	M	V	G	C	M	T	E	T	S	C	A	I	S	A	A	S	Q	F	S	P	A	V	D	.	.	.	F	A	D	L	D	G	N	L	L	I
Template Known Secondary structure				S	G	G	G	T	G	G	G	B	T	T	B	S										T	S														T	T									S											T	T	G	G	G		S	.	.	.						G	G	G	G	B
Template Predicted Secondary structure																																																																					.	.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.				.	.	.	.	350	.	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	Q	Q	V	R	R	W	P	G	S	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	N	D	R	F	K	G	V	E	V	V	N	G
Template Known Secondary structure		S					B						T	T
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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