Job Description P29208 Confidence 81.61% Date Thu Jan 5 11:45:36 GMT 2012 Rank 172 Aligned Residues 58 % Identity 17% Template c3d6rA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:non-structural protein 1; PDBTitle: structure of an avian influenza a virus ns1 protein2 effector domain Resolution 2.00 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		Q	I	P	M	D	A	G	V	V	L	R	D	R	R	L	K	T	R	D	G	L	Y	V	C	L	.	R	E	G	E	R	E	G	W	G	E	I	S	P	L	P	G	F	S	Q	E	T	W	E	E	A	Q	S	V	L	L	A	W	V	N	N	W
Query Conservation																											.
Alig confidence																				.	.						.							.
Template Conservation																				.	.													.
Template Sequence		R	I	T	L	K	A	N	F	S	V	L	F	D	Q	L	E	T	L	.	.	V	S	L	R	A	F	T	D	D	G	A	I	.	V	A	E	I	S	P	I	P	S	M	P	G	H	S	T	E	D	V	K	N	A	I	G	I	L	I	G	G	L
Template Known Secondary structure												S	S	S	S					.	.								T	T				.								T	T	S
Template Predicted Secondary structure																				.	.													.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions