Job Description P29208 Confidence 100.00% Date Thu Jan 5 11:45:36 GMT 2012 Rank 52 Aligned Residues 299 % Identity 17% Template c3cyjA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme-like PDBTitle: crystal structure of a mandelate racemase/muconate lactonizing enzyme-2 like protein from rubrobacter xylanophilus Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.												.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	S	A	Q	V	Y	R	W	Q	I	P	M	D	A	G	V	V	L	R	D	R	R	L	K	T	R	D	G	L	Y	V	C	L	R	E	G	E	R	E	G	W	G	E	I	S	P	L	P	G	F	S	Q	E	T	W	E	E	A	Q	S	V	.	.	.	.	.	.	.	.	.	.	.	L	L	A	W	V	N	N
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	R	L	E	V	S	A	Y	T	V	P	T	D	Y	P	E	S	D	G	T	L	Q	W	D	S	T	T	M	I	L	V	E	A	H	G	G	G	R	K	G	L	G	Y	T	Y	G	D	V	S	V	G	R	F	V	E	S	K	L	A	G	V	A	E	G	S	D	A	L	S	P	P	A	V	W	A	R	M	Q	A
Template Known Secondary structure																					T	T																T	T									S		T										T					T	T	S	B	T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.														.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		W	L	A	G	D	C	E	L	P	Q	M	P	S	V	A	F	G	V	S	C	A	L	A	E	L	T	D	T	L	P	Q	A	A	N	Y	R	A	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	L	C	N	G	D	P	D	D	L	I	L	K	L	A	D	.	.	M	P	G	E	K	V	A	K	V	K	V
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		A	I	R	N	A	G	R	P	G	V	G	A	M	A	V	S	A	V	D	I	A	L	W	D	L	K	A	R	L	L	G	L	P	L	A	D	A	L	P	R	F	H	A	E	V	P	V	Y	G	S	G	G	F	T	S	Y	P	L	R	R	L	Q	E	Q	L	G	G	W	A	A	A	G	I	P	R	V	K	M	K	V
Template Known Secondary structure			T	T	T	T		S	S	T																					T	T		B					S					S	S										T	T	S															T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.			.	.	.
Predicted Secondary structure																			.																												.																	.	.												.	.
Query SS confidence																			.																												.																	.	.												.	.
Query Sequence		G	L	Y	E	A	V	R	D	G	M	V	V	N	L	L	L	E	.	A	I	P	D	L	H	L	R	L	D	A	N	R	A	W	T	P	L	K	G	Q	Q	F	A	K	Y	V	.	N	P	D	Y	R	D	R	I	A	F	L	E	E	P	C	K	.	.	T	R	D	D	S	R	A	F	A	R	E	.	.	T	G	I
Query Conservation																			.																												.																	.	.												.	.
Alig confidence				.															.																												.				.	.	.											.	.												.	.
Template Conservation				.																																															.	.	.
Template Sequence		G	R	.	E	P	E	K	D	P	E	R	V	R	A	A	R	E	A	I	G	E	S	V	E	L	M	V	D	A	N	G	A	Y	T	R	K	Q	A	L	Y	W	A	G	A	F	A	R	E	A	.	.	.	G	I	S	Y	L	E	E	P	V	S	S	E	D	R	E	G	L	R	L	L	R	D	R	G	P	G	G	V
Template Known Secondary structure			S	.	S	G	G	G														T	T	S							T	T		S																	.	.	.								S	S		T	T												S		T	T
Template Predicted Secondary structure				.																																															.	.	.
Template SS confidence
		166	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.				.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	W	D	E	S	L	R	E	P	D	F	A	F	V	A	E	E	G	V	R	A	V	V	I	K	P	T	L	T	G	S	L	E	K	V	R	E	Q	V	Q	A	A	H	A	L	G	L	T	A	V	I	S	S	S	I	E	S	S	L	G	L	T	Q	L	A	R	I	A	A	W	L	T	P	D	T	I	P	G
Query Conservation
Alig confidence																																																										.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.
Template Sequence		A	I	A	A	G	E	Y	E	W	T	L	P	Q	L	H	D	L	A	G	C	V	D	I	L	Q	A	D	V	T	R	C	G	G	I	T	G	L	L	R	V	D	G	I	C	R	G	H	Q	I	P	F	S	A	H	C	A	.	.	.	.	.	.	P	A	V	S	A	H	A	C	C	A	V	E	S	L	L	H	L	E
Template Known Secondary structure							T	T			S									T	T		S						T	T	T	T	T						T	T									T							S		.	.	.	.	.	.								G	G	G		T	T
Template Predicted Secondary structure																																																										.	.	.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.							.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		289		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		L	.	D	T	L	D	L	M	Q	A	Q	Q	V	R	R	W	P	G	S	T	L	P
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		Y	F	H	D	H	A	R	V	E	R	L	L	F	D	G	T	L	D	P	E	G	G
Template Known Secondary structure																					G	G	G
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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