Job Description P29208 Confidence 100.00% Date Thu Jan 5 11:45:36 GMT 2012 Rank 77 Aligned Residues 270 % Identity 18% Template c3cawB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:o-succinylbenzoate synthase; PDBTitle: crystal structure of o-succinylbenzoate synthase from2 bdellovibrio bacteriovorus liganded with mg Resolution 1.87 Å

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		26	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		T	R	D	G	L	Y	V	C	L	.	R	E	G	E	R	E	G	W	G	E	I	S	P	L	P	G	F	S	Q	E	T	W	E	E	A	Q	S	V	L	L	A	W	V	N	N	W	L	A	G	D	C	E	L	P	Q	M	P	S	V	A	F	G	V	S	C	A	L	A	E	L	T	D	T	L	P	Q	A	A	N	Y
Query Conservation											.
Alig confidence											.																															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	E	G	V	L	L	K	V	E	W	N	D	G	L	Y	G	F	A	D	L	H	P	W	P	E	L	G	D	L	S	L	E	E	Q	L	S	D	L	R	.	.	.	.	.	.	.	.	.	.	.	M	G	R	M	T	T	Q	I	E	Q	S	I	W	L	A	R	R	D	A	L	L	R	K	E	K	K	H	V	F
Template Known Secondary structure													T	T	S											G	G	G	T													.	.	.	.	.	.	.	.	.	.	.	T	T																							T		B	T	T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.												.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		105	.	.	.									.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.
Query Sequence		R	A	A	P	.	.	.	.	.	.	.	.	L	C	N	G	D	P	D	D	L	I	L	K	L	A	D	M	P	G	E	K	V	A	K	V	K	V	G	L	Y	E	A	V	R	D	G	M	V	V	N	L	L	L	E	A	I	P	D	L	H	L	R	L	D	A	N	R	A	W	T	P	L	K	G	Q	Q	F	A	K
Query Conservation						.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.																													.														.	.
Template Conservation																																										.														.	.
Template Sequence		D	G	G	E	K	I	K	N	N	Y	L	L	S	H	F	Q	D	L	K	P	G	F	L	D	G	L	K	N	E	G	Y	N	T	V	K	V	K	M	G	R	.	D	L	Q	K	E	A	D	M	L	T	H	I	A	.	.	A	S	G	M	R	M	R	L	D	F	N	A	L	G	S	W	Q	T	F	E	K	F	M	V
Template Known Secondary structure		T	T	S					B						T	T	S				T	T								T	T									S	S	.														.	.		T	T								T	T		S
Template Predicted Secondary structure																																										.														.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	N	P	D	Y	R	D	R	I	A	F	L	E	E	P	C	K	T	R	D	D	S	R	A	F	A	R	E	T	G	I	A	I	A	W	D	E	S	L	R	E	P	D	F	A	F	V	A	E	E	G	V	R	A	V	V	I	K	P	T	L	T	G	S	L	E	K	V	R	E	Q	V	Q	A	A	H	A	L	G
Query Conservation
Alig confidence																					.																																														.	.	.	.
Template Conservation																					.																																														.	.	.	.
Template Sequence		N	L	P	L	T	V	R	P	L	I	E	Y	V	E	D	P	F	P	F	.	D	F	H	A	W	G	E	A	R	K	L	A	K	I	A	L	D	N	Q	Y	D	K	V	P	W	G	K	I	A	S	A	P	F	D	V	I	V	I	K	P	A	K	T	D	V	.	.	.	.	D	K	A	V	A	Q	C	Q	K	W	N
Template Known Secondary structure			S		T	T	T	G	G	G								S	S		.									T	T	T	S					S	T	T	G	G	G	S		G	G	G		S	S		S		S						T	T	T	S			.	.	.	.										T	T
Template Predicted Secondary structure																					.																																														.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.					.	.	.	.	.	240	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.						.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		L	T	A	V	I	S	S	S	I	E	S	S	L	G	L	T	Q	L	A	R	I	A	A	W	L	.	.	.	.	.	T	P	D	T	I	P	G	L	D	T	L	D	L	M	Q	A	Q	Q	V	R	R	W	P	G	S	T	L	P	V	V	E	V	D
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.
Template Conservation
Template Sequence		L	K	L	A	V	T	S	Y	M	D	H	P	V	G	V	V	H	A	V	G	V	A	M	E	L	K	D	K	Y	G	D	M	I	L	E	S	G	C	L	T	H	R	L	Y	Q	M	D	S	F	A	A	E	L	S	T	Q	G	P	Y	L	L	K	N
Template Known Secondary structure							B			S																					G	G	G	B			B	B				G	G	G	B				T	T	G	G	G					T	T
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions