Job Description P29208 Confidence 100.00% Date Thu Jan 5 11:45:36 GMT 2012 Rank 38 Aligned Residues 308 % Identity 16% Template c3bjsB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of a member of enolase superfamily from polaromonas2 sp. js666 Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.																.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																																				.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	S	A	Q	V	Y	R	W	Q	I	P	M	D	A	G	V	V	L	R	D	R	R	L	K	T	R	D	G	L	Y	V	C	L	.	R	E	G	E	R	E	G	W	G	E	I	S	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	F	S	Q	E	T	W	E	E	A	Q	S	V	L	L
Query Conservation																																				.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.																				.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.
Template Sequence		I	T	K	I	N	A	I	P	L	S	Y	R	L	P	.	T	V	T	M	G	V	G	S	T	I	K	R	D	A	I	I	I	R	V	E	T	S	E	G	I	T	G	Y	G	E	A	H	P	G	R	S	P	G	A	I	T	S	L	I	H	N	T	I	A	P	M	L	I	G	M	K	A	T	D	C	V	G	A	W	Q
Template Known Secondary structure																.					T	T																T	T	S										T	T												T	T	T	T	T	T	T	T	S	B	T	T
Template Predicted Secondary structure																.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.															.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		A	W	V	N	N	W	L	A	G	D	C	E	L	P	Q	M	P	S	V	A	F	G	V	S	C	A	L	A	E	L	T	D	T	L	P	Q	A	A	N	Y	R	A	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	C	N	G	D	P	D	D	L	I	L	K	L	A	D	.	.	M	P	G	E	K
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		R	V	H	R	M	Q	L	S	S	H	G	L	G	A	G	A	A	L	A	I	S	G	I	D	M	A	L	W	D	I	R	G	K	A	A	N	M	P	L	Y	E	L	L	G	G	S	K	R	R	I	P	A	Y	A	G	G	I	A	L	G	Y	Q	P	K	E	S	L	A	E	E	A	Q	E	Y	I	A	R	G	Y	K
Template Known Secondary structure							T	T	S	S	S	S		T																							T		B					T	T												S	S		S		S	S															T	T		S
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																									.																																												.	.
Query SS confidence																									.																																												.	.
Query Sequence		V	A	K	V	K	V	G	L	Y	E	A	V	R	D	G	M	V	V	N	L	L	L	E	.	A	I	P	D	L	H	L	R	L	D	A	N	R	A	W	T	P	L	K	G	Q	Q	F	A	K	Y	V	N	P	D	Y	R	D	R	I	A	F	L	E	E	P	C	K	.	.	T	R	D	D	S	R	A	F	A	R	E
Query Conservation																									.																																												.	.
Alig confidence									.																.																															.	.	.											.	.
Template Conservation									.																																															.	.	.
Template Sequence		A	L	K	L	R	I	G	.	D	A	A	R	V	D	I	E	R	V	R	H	V	R	K	V	L	G	D	E	V	D	I	L	T	D	A	N	T	A	Y	T	M	A	D	A	R	R	V	L	P	V	L	A	E	I	.	.	.	Q	A	G	W	L	E	E	P	F	A	C	N	D	F	A	S	Y	R	E	V	A	K	I
Template Known Secondary structure									.	S																		T	T	S							T	T																	T	.	.	.	T		S						S		T	T									T	T	T
Template Predicted Secondary structure									.																																															.	.	.
Template SS confidence
		201	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		206		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure			.																	.	.
Query SS confidence			.																	.	.
Query Sequence		T	.	G	I	A	I	A	W	D	E	S	L	R	E	P	D	F	A	.	.	F	V	A	E	E	G	V	R	A	V	V	I	K	P	T	L	T	G	S	L	E	K	V	R	E	Q	V	Q	A	A	H	A	L	G	L	T	A	V	I	S	S	S	I	E	S	S	L	G	L	T	Q	L	A	R	I	A	A	W	L	T
Query Conservation			.																	.	.
Alig confidence			.																	.	.																																											.
Template Conservation																																																																.
Template Sequence		T	P	L	V	P	I	A	A	G	E	N	H	Y	T	R	F	E	F	G	Q	M	L	D	A	G	A	V	Q	V	W	Q	P	D	L	S	K	C	G	G	I	T	E	G	I	R	I	A	A	M	A	S	A	Y	R	I	P	I	N	A	H	S	S	.	A	T	G	L	N	H	A	A	T	I	H	F	L	A	A	T	E
Template Known Secondary structure			S	S	S						T	T																						B	T	T	T	S	S															T	T			B			B			.	S	S															T
Template Predicted Secondary structure																																																																.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.		.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		283	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		P	D	T	I	P	G	L	.	D	T	L	D	L	M	Q	A	Q	Q	V	R	R	W	P	G	S	T	L	P	V	V	E	V	D
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		N	A	G	Y	F	E	A	C	V	S	K	F	N	P	F	R	D	M	F	G	T	F	E	I	G	A	D	G	C	V	E	P	P
Template Known Secondary structure		T	B									S	S		T	T	T	T	S	S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions