Return to main results Retrieve Phyre Job Id

Job DescriptionP29208
Confidence28.91%DateThu Jan 5 11:45:36 GMT 2012
Rank293Aligned Residues91
% Identity16%Templatec3atyA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:prostaglandin f2a synthase; PDBTitle: crystal structure of tcoye
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   143......150..... ....160 ....... ..170.........180.........190... ......200.........210
Predicted Secondary structure 


..
....





...









...





Query SS confidence 












. .




. . . .






. . .

























. . .
















Query Sequence  GMVVNLLLEAIPD. . LHLRL. . . . DANRAWT. . . PLKGQQFAKYVNPDYRDRIAFLEEPC. . . KTRDDSRAFARETGIAI
Query Conservation     
   
    
..  
 
....


  
 ...   
      
       
   
 
 ...        
      

Alig confidence 












..




....






...

























...
















Template Conservation   


 


  

 
 
  


  
   
            
   

  


 
 

 
              
       
Template Sequence  YDVTKSVCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGDVVAWVRGSYSGVK
Template Known Secondary structure 
GGG
TT

GGG


S
GGG

S
S
TTS




TT

S
Template Predicted Secondary structure 

































Template SS confidence 















































































   231........240.........250.........260.........270.........280.........290.........300.........310
 
   211........220.. .......230....
Predicted Secondary structure 





..




Query SS confidence 











. .











Query Sequence  AWDESLREPDFA. . FVAEEGVRAVVI
Query Conservation 
 


       ..       
 
 
Alig confidence 



.






..











Template Conservation 
  
.    
 

  
  
  
 
  
Template Sequence  ISNL. RYDFEEADQQIREGKVDAVAF
Template Known Secondary structure  S.S

TTS
S
Template Predicted Secondary structure 

.







Template SS confidence 

























   311... .....320.........330.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions