Job Description P29208 Confidence 100.00% Date Thu Jan 5 11:45:36 GMT 2012 Rank 91 Aligned Residues 289 % Identity 17% Template c2podA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:mandelate racemase / muconate lactonizing enzyme; PDBTitle: crystal structure of a member of enolase superfamily from burkholderia2 pseudomallei k96243 Resolution 2.34 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																				.																																												.	.
Query SS confidence																																				.																																												.	.
Query Sequence		M	R	S	A	Q	V	Y	R	W	Q	I	P	M	D	A	G	V	V	L	R	D	R	R	L	K	T	R	D	G	L	Y	V	C	L	.	R	E	G	E	R	E	G	W	G	E	I	S	P	L	P	G	F	S	Q	E	T	W	E	E	A	Q	S	V	L	L	A	W	V	N	N	W	L	A	G	D	C	E	L	.	.
Query Conservation																																				.																																												.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																.	.	.	.	.	.	.																						.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Template Sequence		I	T	E	I	E	T	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	E	F	P	N	L	L	W	V	L	V	H	T	D	E	G	I	T	G	L	G	E	T	F	Y	G	A	.	.	.	.	.	.	.	C	S	A	E	A	Y	I	H	E	W	A	A	N	R	L	I	G	E	D	P	L	Q	I
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S	T	T									T	T	S									S			.	.	.	.	.	.	.										T	T					T	T	S		T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10															.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.								.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
																		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																							.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	M	P	S	V	A	F	G	V	S	C	A	L	A	E	L	T	D	T	L	P	Q	A	A	N	Y	R	A	A	P	L	C	N	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	D	L	I	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	R	H	A	K	R	L	S	G	Y	L	G	F	R	S	A	G	A	E	X	R	G	N	S	A	L	D	I	A	L	W	D	I	F	G	K	A	T	G	Q	P	I	Y	Q	L	L	G	G	K	C	R	D	T	I	R	T	Y	N	T	C	A	G	P	H	Y	A	R	Y	D	D	L	N	A	F	L	H	R	A	D	E
Template Known Secondary structure								T			S	S	S	T	T	T	T																							T		B					T	T			S		S
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.														.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure						.	.														.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query SS confidence						.	.														.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query Sequence		K	L	A	D	.	.	M	P	G	E	K	V	A	K	V	K	V	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	A	V	R	D	G	M	V	V	N	L	L	L	E	.	A	I	P	D	L	H	L	R	L	D	A	N	R	A	W	T	P	L	K	G	Q	Q	F	A	K	Y	V	N	P	D	Y	R
Query Conservation						.	.														.	.	.	.	.	.	.	.	.	.	.	.	.																.
Alig confidence						.	.														.	.	.	.	.	.	.	.	.	.	.	.	.																.																															.	.
Template Conservation																																																																																.	.
Template Sequence		L	A	L	D	L	L	D	S	G	I	T	A	X	K	I	W	P	F	D	P	Y	A	E	A	S	D	G	Y	Y	I	S	K	S	D	L	K	R	A	L	E	P	F	E	K	I	R	R	A	V	G	D	K	X	D	V	X	V	E	F	H	S	L	W	N	L	P	P	A	L	Q	I	A	E	A	L	R	E	Y	.	.
Template Known Secondary structure										T								T	T	G	G	G	S	G	G	G	T	T	S											T										T	G	G	G								T	T															G	G	G	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.																													.	.
Query SS confidence													.	.																													.	.
Query Sequence		D	R	I	A	F	L	E	E	P	C	K	.	.	T	R	D	D	S	R	A	F	A	R	E	T	G	I	A	I	A	W	D	E	S	L	R	E	P	D	F	A	.	.	F	V	A	E	E	G	V	R	A	V	V	I	K	P	T	L	T	G	S	L	E	K	V	R	E	Q	V	Q	A	A	H	A	L	G	L	T	A
Query Conservation													.	.																													.	.
Alig confidence		.											.	.																													.	.
Template Conservation		.
Template Sequence		.	E	T	F	W	H	E	D	P	I	R	X	D	S	L	S	S	L	K	R	Y	A	E	R	S	L	A	P	V	C	A	S	E	T	L	A	T	R	W	G	F	R	D	L	L	E	T	N	A	A	G	I	V	X	L	D	I	S	W	C	G	G	L	S	E	A	R	K	I	A	S	X	A	E	A	W	H	L	P	V
Template Known Secondary structure		.	T		S				S		S		S	S	S	G	G	G							T		S	S						T	T													T	T									T	T	T	T	T															T	T
Template Predicted Secondary structure		.
Template SS confidence
			239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.			.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		V	I	S	S	S	I	E	S	S	L	G	L	T	Q	L	A	R	I	A	A	W	L	T	P	D	T	I	P	.	.	G	L	D	T	L	D	L	M	Q	A	Q	Q	V	R	R	W	P	G	S	T	L	P	V	V	E	V	D
Query Conservation																														.	.
Alig confidence							.																							.	.
Template Conservation							.
Template Sequence		A	P	H	D	C	.	T	G	P	V	V	L	T	A	S	T	H	L	S	L	N	A	P	N	A	L	V	Q	E	S	V	R	A	F	Y	D	G	W	Y	R	D	L	V	T	A	L	P	T	V	K	D	G	H	I	T	V	P
Template Known Secondary structure						S	.	S																T	T	B											T	T	T	T	T	T	T	B	S							T	T
Template Predicted Secondary structure							.
Template SS confidence
		318	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions