Job Description P29208 Confidence 100.00% Date Thu Jan 5 11:45:36 GMT 2012 Rank 28 Aligned Residues 310 % Identity 17% Template c2pgwC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:muconate cycloisomerase; PDBTitle: crystal structure of a putative muconate cycloisomerase from2 sinorhizobium meliloti 1021 Resolution 1.95 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.															.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																																				.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	S	A	Q	V	Y	R	W	Q	I	P	M	D	A	G	V	V	L	R	D	R	R	L	K	T	R	D	G	L	Y	V	C	L	.	R	E	G	E	R	E	G	W	G	E	I	S	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	F	S	Q	E	T	W	E	E	A	Q	S	V	L	L	A
Query Conservation																																				.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	S	N	V	R	V	R	P	L	V	L	P	L	K	Q	P	Y	H	W	S	Y	G	I	R	E	S	F	A	V	N	L	I	E	I	E	A	D	D	G	T	V	G	I	G	E	C	T	V	A	P	D	Q	T	G	T	A	A	I	L	Y	R	L	A	K	H	L	V	G	H	S	P	H	D	V	A	P	L	I	A	R
Template Known Secondary structure																					S	S	S															T	T	S										T	T															T	T	T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		66			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.													.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.
Predicted Secondary structure			.	.																																											.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence			.	.																																											.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		W	.	.	V	N	N	W	L	A	G	D	C	E	L	P	Q	M	P	S	V	A	F	G	V	S	C	A	L	A	E	L	T	D	T	L	P	Q	A	A	N	Y	R	A	A	P	.	.	.	.	.	.	.	.	.	.	.	.	L	C	N	G	D	P	D	D	L	I	L	K	L	A	D	.	.	M	P	G	E	K	V
Query Conservation			.	.																																											.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence			.	.																																											.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		I	F	H	Q	E	Y	L	G	H	G	A	N	I	X	R	A	A	N	Q	I	F	S	G	I	D	X	A	X	W	D	L	Q	G	K	L	A	G	L	P	V	H	Q	L	L	G	G	A	H	R	K	A	V	G	Y	F	Y	F	L	Q	G	E	T	A	E	E	L	A	R	D	A	A	V	G	H	A	Q	G	E	R	V
Template Known Secondary structure							T	G	G	G	T																											T		B	G	G	G	G	T	T			S	S	S				B							S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		A	K	V	K	V	G	L	Y	E	A	V	R	D	G	M	V	V	N	L	L	L	E	A	I	P	D	L	H	L	R	L	D	A	N	R	A	W	T	P	L	K	G	Q	Q	F	A	K	Y	V	N	P	D	Y	R	D	R	I	A	F	L	E	E	P	C	K	.	.	T	R	D	D	S	R	A	F	A	R	E	T	G
Query Conservation																																																																			.	.
Alig confidence								.																																														.	.	.											.	.
Template Conservation								.																																														.	.	.
Template Sequence		F	Y	L	K	V	G	.	R	G	E	K	L	D	L	E	I	T	A	A	V	R	G	E	I	G	D	A	R	L	R	L	D	A	N	E	G	W	S	V	H	D	A	I	N	X	C	R	K	L	E	K	Y	.	.	.	D	I	E	F	I	E	Q	P	T	V	S	W	S	I	P	A	X	A	H	V	R	E	K	V	G
Template Known Secondary structure								.	S														T	T	S	T	T								T	T															G	G	G	.	.	.			S						S		T	T													S
Template Predicted Secondary structure								.																																														.	.	.
Template SS confidence
		166	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		I	A	I	A	W	D	E	S	L	R	E	P	D	F	A	.	.	F	V	A	E	E	G	V	R	A	V	V	I	K	P	T	L	T	G	S	L	E	K	V	R	E	Q	V	Q	A	A	H	A	L	G	L	T	A	V	I	S	S	S	I	E	S	S	L	G	L	T	Q	L	A	R	I	A	A	W	L	T	P	D	T
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		I	P	I	V	A	D	Q	A	A	F	T	L	Y	D	V	Y	E	I	C	R	Q	R	A	A	D	X	I	C	I	G	P	R	E	I	G	G	I	Q	P	X	X	K	A	A	A	V	A	E	A	A	G	L	K	I	C	I	H	S	S	F	T	T	G	I	T	T	C	A	E	H	H	I	G	L	A	I	P	N	L	D
Template Known Secondary structure		S					S	T	T			S										T	T			S										T	S														T	T									S																	S	S	B
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		I	P	G	L	D	T	L	D	L	M	Q	A	Q	Q	V	R	R	W	.	P	G	S	T	L	P	V	V	E	V	D
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		D	G	N	Q	I	X	W	Q	L	V	Q	E	D	I	V	S	S	P	D	L	T	P	K	N	G	W	L	D	A	F
Template Known Secondary structure		S	S	B				G	G	G	B	T	T		S				S					B	T	T
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions