Job Description P29208 Confidence 100.00% Date Thu Jan 5 11:45:36 GMT 2012 Rank 94 Aligned Residues 313 % Identity 11% Template c2p0iA_ PDB info PDB header:lyase Chain: A: PDB Molecule:l-rhamnonate dehydratase; PDBTitle: crystal structure of l-rhamnonate dehydratase from gibberella zeae Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.						.	.	.	.	.	.	.	.	20	.	.	.									.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.													.	50	.	.	.	.
Predicted Secondary structure													.	.	.	.	.													.	.	.	.	.	.	.	.												.															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.													.	.	.	.	.	.	.	.												.															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	S	A	Q	V	Y	R	W	Q	I	.	.	.	.	.	P	M	D	A	G	V	V	L	R	D	R	R	.	.	.	.	.	.	.	.	L	K	T	R	D	G	L	Y	V	C	L	.	R	E	G	E	R	E	G	W	G	E	I	S	P	L	.	.	.	.	.	.	.	.	.	.	.	.	P	G	F	S	Q	E
Query Conservation													.	.	.	.	.													.	.	.	.	.	.	.	.												.															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.													.	.	.	.	.	.	.	.												.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	K	A	I	R	S	F	I	I	G	H	W	L	I	D	S	D	I	S	T	P	A	S	K	W	E	Q	Y	K	K	S	R	T	S	W	G	I	N	V	L	G	S	F	L	V	E	I	E	A	T	D	G	T	V	G	F	A	T	G	F	G	G	P	P	A	C	W	L	V	H	Q	H	F	E	R	F	L	I	G	A
Template Known Secondary structure														T	T	T	S					T	T	T	T	S	G	G	G	S	S						T	T	T	S	S										T	T	S																				T	G	G	G	G	T	T	T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.													.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	W	E	E	A	Q	S	V	L	L	A	W	V	N	N	W	L	A	G	D	C	E	L	P	Q	M	P	S	V	A	F	G	V	S	C	A	L	A	E	L	T	D	T	L	P	Q	A	A	N	Y	R	A	A	P	L	C	N	G	D	.	.	.	.	.	.	.	.	.	.	.	.	P	D	D	L	I	L	K	L	A
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.																																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.
Template Sequence		D	P	R	N	.	T	N	L	L	F	E	Q	X	Y	R	A	S	X	F	Y	G	R	K	G	L	P	I	A	V	I	S	V	I	D	L	A	L	W	D	L	L	G	K	V	R	N	E	P	V	Y	R	L	I	G	G	A	T	K	E	R	L	D	F	Y	C	T	G	P	E	P	T	A	A	K	A	X	G	F	W	G
Template Known Secondary structure			T	T		.												T	T	T	T		S	S	S																						T	S	B	G	G	G	T	T	T			S		S								S	S									T		S
Template Predicted Secondary structure						.
Template SS confidence
		104	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.
Predicted Secondary structure																															.																																												.	.
Query SS confidence																															.																																												.	.
Query Sequence		D	M	P	G	E	K	V	A	K	V	K	V	G	L	Y	E	A	V	R	D	G	M	V	V	N	L	L	L	E	.	A	I	P	D	L	H	L	R	L	D	A	N	R	A	W	T	P	L	K	G	Q	Q	F	A	K	Y	V	N	P	D	Y	R	D	R	I	A	F	L	E	E	P	C	K	.	.	T	R	D	D	S
Query Conservation																															.																																												.	.
Alig confidence															.																.																															.	.	.											.	.
Template Conservation															.																																															.	.	.
Template Sequence		G	K	V	P	L	P	F	C	P	D	D	G	H	.	E	G	L	R	K	N	V	E	F	L	R	K	H	R	E	A	V	G	P	D	F	P	I	X	V	D	C	Y	X	S	L	N	V	S	Y	T	I	E	L	V	K	A	C	L	D	L	.	.	.	N	I	N	W	W	E	E	C	L	S	P	D	D	T	D	G	F
Template Known Secondary structure										G	G	G			.																			S	S	S							T	T														T	G	G	G	.	.	.			S						S		T	T		T	T
Template Predicted Secondary structure															.																																															.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.				.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure					.																					.	.
Query SS confidence					.																					.	.
Query Sequence		R	A	F	.	A	R	E	T	G	I	A	I	A	W	D	E	S	L	R	E	P	D	F	A	.	.	F	V	A	E	E	G	V	R	A	V	V	I	K	P	T	L	T	G	S	L	E	K	V	R	E	Q	V	Q	A	A	H	A	L	G	L	T	A	V	I	S	S	S	I	E	S	S	L	G	L	T	Q	L	A	R
Query Conservation					.																					.	.
Alig confidence					.																					.	.
Template Conservation
Template Sequence		A	L	I	K	R	A	H	P	T	V	K	F	T	T	G	E	H	E	Y	S	R	Y	G	F	R	K	L	V	E	G	R	N	L	D	I	I	Q	P	D	V	X	W	L	G	G	L	T	E	L	L	K	V	A	A	L	A	A	A	Y	D	V	P	V	V	P	H	A	S	G	P	Y	S	Y	H	F	Q	I	S	Q	P
Template Known Secondary structure									T	T	S						T	T												T	T				S						T	T	T	S	S															T	T			B						T											T
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		277	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		I	A	A	W	L	T	.	P	D	T	I	P	G	L	D	T	L	D	L	M	Q	A	Q	Q	V	R	R	W	P	G	S	T	L	P	V	V	E	V	D	A	L	E	R
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		N	T	P	F	Q	E	Y	L	A	N	S	P	D	G	K	S	V	L	P	V	F	G	D	L	F	I	D	E	P	I	P	T	K	G	Y	L	T	T	A	D	L	D	K
Template Known Secondary structure		T										S	T	T	S	S	S				T	T	T	T	S	B	S						T	T	S				G	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions