Job Description P29208 Confidence 100.00% Date Thu Jan 5 11:45:36 GMT 2012 Rank 93 Aligned Residues 302 % Identity 10% Template c2oz3F_ PDB info PDB header:lyase Chain: F: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of l-rhamnonate dehydratase from azotobacter2 vinelandii Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.								.	.	.	.	.										.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.													.	50	.
Predicted Secondary structure														.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.																		.															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.																		.															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	S	A	Q	V	Y	R	W	Q	I	P	.	.	.	.	.	.	.	M	D	A	G	V	.	.	.	.	.	.	.	.	.	V	L	R	D	R	R	L	K	T	R	D	G	L	Y	V	C	L	.	R	E	G	E	R	E	G	W	G	E	I	S	P	L	.	.	.	.	.	.	.	.	.	.	.	.	P	G	F
Query Conservation														.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.																		.															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.						.												.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.
Template Sequence		I	K	Q	V	R	A	F	V	L	R	G	D	G	H	W	I	D	D	H	I	S	T	P	X	G	K	Y	P	E	Y	R	Q	S	R	R	S	F	G	.	I	N	V	L	G	T	L	V	V	E	I	E	A	S	D	G	N	V	G	F	A	V	T	T	G	G	E	P	A	A	Y	I	V	E	K	H	L	A	R	F	L
Template Known Secondary structure														S		G	G	G	S	S				G	G	G	G	S	G	G	G	S	S						T	.	T	T	S	S										T	T	S																				T	G	G	G	G	T
Template Predicted Secondary structure																																								.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.											110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	E	T	W	E	E	A	Q	S	V	L	L	A	W	V	N	N	W	L	A	G	D	C	E	L	P	Q	M	P	S	V	A	F	G	V	S	C	A	L	A	E	L	T	D	T	L	P	Q	A	A	N	Y	R	A	A	P	L	.	.	.	.	.	.	.	.	.	.	C	N	G	D	P	D	D	L	I	L	K	L
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.
Alig confidence										.																																																		.	.	.	.	.	.	.	.	.	.
Template Conservation										.
Template Sequence		E	G	A	R	V	T	D	I	.	E	R	I	W	D	Q	X	Y	N	S	T	L	Y	Y	G	R	K	G	L	V	I	N	T	I	S	G	V	D	L	A	L	W	D	L	L	G	K	V	R	R	E	P	V	H	Q	L	L	G	G	A	V	R	D	E	L	Q	F	Y	A	T	G	A	R	P	D	L	A	Q	K	X	G
Template Known Secondary structure		T	T	S	B	T	T			.												G	G	G		S	S	T																						T	S	B					T	T			S	S	S								S	S								T	T
Template Predicted Secondary structure										.
Template SS confidence
		94	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		122	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.
Predicted Secondary structure				.	.																													.																																												.	.
Query SS confidence				.	.																													.																																												.	.
Query Sequence		A	D	.	.	M	P	G	E	K	V	A	K	V	K	V	G	L	Y	E	A	V	R	D	G	M	V	V	N	L	L	L	E	.	A	I	P	D	L	H	L	R	L	D	A	N	R	A	W	T	P	L	K	G	Q	Q	F	A	K	Y	V	N	P	D	Y	R	D	R	I	A	F	L	E	E	P	C	K	.	.	T	R
Query Conservation				.	.																													.																																												.	.
Alig confidence				.	.													.																.																															.	.	.											.	.
Template Conservation																		.																																															.	.	.
Template Sequence		F	I	G	G	K	X	P	L	H	H	G	P	S	E	G	E	.	E	G	L	K	K	N	L	E	E	L	A	T	X	R	E	R	V	G	P	D	F	W	L	X	F	D	C	W	X	S	L	D	L	N	Y	A	T	R	L	A	R	G	A	R	E	Y	.	.	.	G	L	K	W	I	E	E	A	L	P	P	D	D	Y
Template Known Secondary structure			S										G	G	G			.																			S	S	S							T	T															G	G	G	.	.	.	T								S		T	T
Template Predicted Secondary structure																		.																																															.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.				.	.	.	.	.	240	.	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure															.	.														.	.
Query SS confidence															.	.														.	.
Query Sequence		D	D	S	R	A	F	A	R	E	T	G	I	A	.	.	I	A	W	D	E	S	L	R	E	P	D	F	A	.	.	F	V	A	E	E	G	V	R	A	V	V	I	K	P	T	L	T	G	S	L	E	K	V	R	E	Q	V	Q	A	A	H	A	L	G	L	T	A	V	I	S	S	S	I	E	S	S	L	G	L	T
Query Conservation															.	.														.	.
Alig confidence															.	.														.	.
Template Conservation
Template Sequence		W	G	Y	A	E	L	R	R	N	A	P	T	G	X	X	V	T	T	G	E	H	E	A	T	R	W	G	F	R	X	L	L	E	X	G	C	C	D	I	I	Q	P	D	V	G	W	C	G	G	V	T	E	L	L	K	I	S	A	L	A	D	A	H	N	A	L	V	V	P	H	G	S	S	V	Y	S	Y	H	F	V
Template Known Secondary structure											S		T	T							T	T													T	T			S						T	T	T	S	S															T	T									T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		Q	L	A	R	I	A	A	W	L	T	.	.	P	D	T	I	P	G	L	D	T	L	D	L	M	Q	A	Q	Q	V	R	R	W	P	G	S	T	L
Query Conservation												.	.
Alig confidence												.	.
Template Conservation
Template Sequence		A	T	R	Q	N	S	P	F	A	E	F	L	X	X	A	P	K	A	D	Q	V	V	P	X	F	H	P	Q	L	L	G	E	P	V	P	E	N	G
Template Known Secondary structure		T	T		T	T			S							S	T	T	S		S				T	T	T	T	T			T					B	T	T
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions