Job Description P29208 Confidence 100.00% Date Thu Jan 5 11:45:36 GMT 2012 Rank 44 Aligned Residues 310 % Identity 18% Template c2ovlA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative racemase; PDBTitle: crystal structure of a racemase from streptomyces2 coelicolor a3(2) Resolution 2.13 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.																.	.
Predicted Secondary structure																							.														.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.														.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	S	A	Q	V	Y	R	W	Q	I	P	M	D	A	G	V	V	L	R	D	.	R	R	L	K	T	R	D	G	L	Y	V	C	L	.	R	E	G	E	R	E	G	W	G	E	I	S	P	L	P	G	F	S	Q	E	T	W	E	E	A	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L
Query Conservation																							.														.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.														.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	R	V	R	T	D	L	Y	R	I	P	L	P	T	R	L	T	D	S	T	H	G	A	X	X	D	F	E	L	I	T	V	R	I	E	D	S	D	G	A	T	G	L	G	Y	T	Y	T	V	N	H	G	G	A	A	V	A	T	X	V	D	K	D	L	R	G	C	L	L	G	A	D	A	E	Q	I	E	K	I
Template Known Secondary structure																			B		T	T	T																T	T	S											S	S	S											T	T					T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.														.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		L	A	W	V	N	N	W	L	A	G	D	C	E	L	P	Q	M	P	S	V	A	F	G	V	S	C	A	L	A	E	L	T	D	T	L	P	Q	A	A	N	Y	R	A	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	L	C	N	G	D	P	D	D	L	I	L	K	L	A	D	.	.	M	P	G	E	K
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		W	Q	S	X	W	W	R	L	H	Y	A	G	R	G	G	H	A	T	S	A	I	S	A	V	D	I	A	L	W	D	L	K	G	I	R	A	R	T	P	L	W	K	L	F	G	G	Y	D	P	V	V	P	V	Y	A	G	G	I	D	L	E	L	P	V	A	D	L	K	T	Q	A	D	R	F	L	A	G	G	F	R
Template Known Secondary structure									T		T	T		S	S	T																					T	T	S	B					T	T				S										B	T	T	S															T	T		S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																									.																																												.	.
Query SS confidence																									.																																												.	.
Query Sequence		V	A	K	V	K	V	G	L	Y	E	A	V	R	D	G	M	V	V	N	L	L	L	E	.	A	I	P	D	L	H	L	R	L	D	A	N	R	A	W	T	P	L	K	G	Q	Q	F	A	K	Y	V	N	P	D	Y	R	D	R	I	A	F	L	E	E	P	C	K	.	.	T	R	D	D	S	R	A	F	A	R	E
Query Conservation																									.																																												.	.
Alig confidence																									.																															.	.	.											.	.
Template Conservation																																																								.	.	.
Template Sequence		A	I	K	X	K	V	G	R	P	D	L	K	E	D	V	D	R	V	S	A	L	R	E	H	L	G	D	S	F	P	L	X	V	D	A	N	X	K	W	T	V	D	G	A	I	R	A	A	R	A	L	A	P	F	.	.	.	D	L	H	W	I	E	E	P	T	I	P	D	D	L	V	G	N	A	R	I	V	R	E
Template Known Secondary structure										S	S																	T	T	S							T	T		S													G	G	G	.	.	.			S						S		T	T
Template Predicted Secondary structure																																																								.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		T	G	I	A	I	A	W	D	E	S	L	R	E	P	D	F	A	.	.	F	V	A	E	E	G	V	R	A	V	V	I	K	P	T	L	T	G	S	L	E	K	V	R	E	Q	V	Q	A	A	H	A	L	G	L	T	A	V	I	S	S	S	I	E	S	S	L	G	L	T	Q	L	A	R	I	A	A	W	L	T	P
Query Conservation																			.	.
Alig confidence																			.	.																																															.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.
Template Sequence		S	G	H	T	I	A	G	G	E	N	L	H	T	L	Y	D	F	H	N	A	V	R	A	G	S	L	T	L	P	E	P	D	V	S	N	I	G	G	Y	T	T	F	R	K	V	A	A	L	A	E	A	N	N	X	L	L	T	S	H	G	V	H	D	L	T	.	.	.	.	.	.	V	H	A	L	A	S	V	P	H
Template Known Secondary structure				S						T	T			S											T			S						T	T	T	T	T	S														T	T							S						.	.	.	.	.	.					T	S		T	T
Template Predicted Secondary structure																																																																			.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.							.	.	.	.	310	.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.				.	.	.	.	.	.	.					310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.								.	.	.	.
Query SS confidence																					.	.	.								.	.	.	.
Query Sequence		D	T	I	P	G	L	D	T	L	D	L	M	Q	A	Q	Q	V	R	R	.	.	.	W	P	G	S	T	L	P	.	.	.	.	V	V	E	V	D	A	L	E	R	L
Query Conservation																					.	.	.								.	.	.	.
Alig confidence																					.	.	.								.	.	.	.
Template Conservation
Template Sequence		R	T	Y	X	E	A	H	L	H	A	Y	X	A	E	P	X	A	V	T	D	G	C	V	S	A	P	D	R	P	G	H	G	V	V	L	D	F	E	R	L	G	R	L
Template Known Secondary structure										G	G	G	B	S	S					B	T	T							S	S	B	T				B							T	T
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions