Job Description P29208 Confidence 100.00% Date Thu Jan 5 11:45:36 GMT 2012 Rank 35 Aligned Residues 309 % Identity 13% Template c2nqlB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:isomerase/lactonizing enzyme; PDBTitle: crystal structure of a member of the enolase superfamily from2 agrobacterium tumefaciens Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.																				.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	S	A	Q	V	Y	R	W	Q	I	P	M	D	A	G	V	V	L	R	D	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	T	R	D	G	L	Y	V	C	L	.	R	E	G	E	R	E	G	W	G	E	I	S	P	L	P	G	.	.	.	.	.	.	.	.	.	.
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	T	V	E	V	F	T	L	T	Q	P	R	K	V	P	Y	L	G	A	L	R	E	G	E	V	V	N	P	N	G	Y	I	V	R	K	G	N	R	T	V	Y	P	T	F	D	R	S	V	L	V	R	M	T	T	E	A	G	T	V	G	W	G	E	T	Y	G	I	V	A	P	G	A	V	A	A	L	I	N	D
Template Known Secondary structure													S	S					S	S				T	T			B		T	T	S					T	T	T						S	S											T	T											S	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
							51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.													.	110	.	.	.
Predicted Secondary structure		.	.	.	.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	F	S	Q	E	T	W	E	E	A	Q	S	V	L	L	A	W	V	N	N	W	L	A	G	D	C	E	L	P	Q	M	P	S	V	A	F	G	V	S	C	A	L	A	E	L	T	D	T	L	P	Q	A	A	N	Y	R	A	A	P	.	.	.	.	.	.	.	.	.	.	.	.	L	C	N	G	D
Query Conservation		.	.	.	.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	A	G	F	V	I	G	R	D	A	S	D	P	S	A	V	Y	D	D	L	Y	D	M	M	R	V	R	G	Y	T	G	G	F	Y	V	D	A	L	A	A	L	D	I	A	L	W	D	I	A	G	Q	E	A	G	K	S	I	R	D	L	L	G	G	G	V	D	S	F	P	A	Y	V	S	G	L	P	E	R	T
Template Known Secondary structure		T						T	T			S	S	S											T	T	G	G	G	T		S	S																							T	S	B					T	T				S												S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		114	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure												.	.																													.
Query SS confidence												.	.																													.
Query Sequence		P	D	D	L	I	L	K	L	A	D	.	.	M	P	G	E	K	V	A	K	V	K	V	G	L	Y	E	A	V	R	D	G	M	V	V	N	L	L	L	E	.	A	I	P	D	L	H	L	R	L	D	A	N	R	A	W	T	P	L	K	G	Q	Q	F	A	K	Y	V	N	P	D	Y	R	D	R	I	A	F	L	E
Query Conservation												.	.																													.
Alig confidence												.	.													.																.																															.	.	.
Template Conservation																										.																																															.	.	.
Template Sequence		L	K	A	R	G	E	L	A	K	Y	W	Q	D	R	G	F	N	A	F	K	F	A	T	P	.	V	A	D	D	G	P	A	A	E	I	A	N	L	R	Q	V	L	G	P	Q	A	K	I	A	A	D	M	H	W	N	Q	T	P	E	R	A	L	E	L	I	A	E	M	Q	P	F	.	.	.	D	P	W	F	A	E
Template Known Secondary structure															T	T								T	T	.	S		T	T															T	T	S								S		S													G	G	G	.	.	.			S
Template Predicted Secondary structure																										.																																															.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.				.	.	.	.	.	240
		191	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure						.	.																													.	.
Query SS confidence						.	.																													.	.
Query Sequence		E	P	C	K	.	.	T	R	D	D	S	R	A	F	A	R	E	T	G	I	A	I	A	W	D	E	S	L	R	E	P	D	F	A	.	.	F	V	A	E	E	G	V	R	A	V	V	I	K	P	T	L	T	G	S	L	E	K	V	R	E	Q	V	Q	A	A	H	A	L	G	L	T	A	V	I	S	S	S	I	E
Query Conservation						.	.																													.	.
Alig confidence						.	.																													.	.																	.
Template Conservation																																																						.
Template Sequence		A	P	V	W	T	E	D	I	A	G	L	E	K	V	S	K	N	T	D	V	P	I	A	V	G	E	E	W	R	T	H	W	D	M	R	A	R	I	E	R	C	R	I	A	I	V	Q	P	E	M	G	H	.	K	G	I	T	N	F	I	R	I	G	A	L	A	A	E	H	G	I	D	V	I	P	H	A	T	V	G
Template Known Secondary structure				S		T	T										T	S			S						T	T			S									T	T	S												.																	T										S
Template Predicted Secondary structure																																																						.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		S	S	L	G	L	T	Q	L	A	R	I	A	A	W	L	T	P	D	T	I	P	G	L	D	T	L	D	L	.	M	Q	A	Q	Q	V	R	R	W	P	G	S	T	L	P	V	V	E	V	D
Query Conservation																														.
Alig confidence																														.
Template Conservation
Template Sequence		A	G	I	F	L	A	A	S	L	Q	A	S	S	T	L	S	M	L	K	G	H	E	F	Q	H	S	I	F	E	P	N	R	R	L	L	D	G	D	M	D	C	R	E	G	R	Y	H	L	P
Template Known Secondary structure		S	S											T	T		T	T	B																									T	T
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions