Job Description P29208 Confidence 100.00% Date Thu Jan 5 11:45:36 GMT 2012 Rank 57 Aligned Residues 304 % Identity 18% Template c2hzgB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme/enolase PDBTitle: crystal stucture of predicted mandelate racemase from rhodobacter2 sphaeroides Resolution 2.02 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.																						.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	S	A	Q	V	Y	R	W	Q	I	P	M	D	A	G	V	V	L	R	D	R	R	L	K	T	R	D	G	L	Y	V	C	L	R	E	G	E	R	E	G	W	G	E	I	S	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	F	S	Q	E	T	W	E	E	A
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.
Template Sequence		I	D	A	V	D	L	F	Y	L	S	M	P	E	V	T	D	A	A	D	G	.	.	.	.	.	S	Q	D	A	L	L	V	R	V	A	A	G	G	H	I	G	W	G	E	C	E	A	A	P	L	P	S	I	A	A	F	V	C	P	K	S	H	G	V	C	R	P	V	S	D	S	V	L	G	Q	R	L	D	G	P
Template Known Secondary structure													S	S			S	S	S		G	.	.	.	.	.	G	G										T	T								S	S														S	B	T	T	B			G	G	G	G	T	T	T		B		S	S
Template Predicted Secondary structure																						.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.						.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.														.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		Q	S	V	L	L	A	W	V	N	N	W	L	A	G	D	C	E	L	P	Q	M	P	S	V	A	F	G	V	S	C	A	L	A	E	L	T	D	T	L	P	Q	A	A	N	Y	R	A	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	L	C	N	G	D	P	D	D	L	I	L	K	L	A	D	.	.	M
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence			.																																																.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation			.
Template Sequence		D	.	D	I	A	R	I	A	A	L	V	G	Y	N	S	M	D	L	L	Q	A	P	H	M	L	S	G	I	E	M	A	L	W	D	L	L	G	R	R	L	S	A	P	A	W	A	L	L	G	Y	S	A	S	H	G	K	R	P	Y	A	S	L	L	F	G	D	T	P	Q	E	T	L	E	R	A	R	A	A	R	R
Template Known Secondary structure			.													T	T	T		T	T																				T	T		B					T	T		S					B										S	S
Template Predicted Secondary structure			.
Template SS confidence
		80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.
Predicted Secondary structure												.	.	.																		.																		.	.																											.	.
Query SS confidence												.	.	.																		.																		.	.																											.	.
Query Sequence		P	G	E	K	V	A	K	V	K	V	.	.	.	G	L	Y	E	A	V	R	D	G	M	V	V	N	L	L	L	E	.	A	I	P	D	L	H	L	R	L	D	A	N	R	A	W	T	P	.	.	L	K	G	Q	Q	F	A	K	Y	V	N	P	D	Y	R	D	R	I	A	F	L	E	E	P	C	K	.	.	T	R
Query Conservation												.	.	.																		.																		.	.																											.	.
Alig confidence												.	.	.																		.																		.	.														.	.	.											.	.
Template Conservation																																																																	.	.	.
Template Sequence		D	G	F	A	A	V	K	F	G	W	G	P	I	G	R	G	T	V	A	A	D	A	D	Q	I	M	A	A	R	E	G	L	G	P	D	G	D	L	M	V	D	V	G	Q	I	F	G	E	D	V	E	A	A	A	A	R	L	P	T	L	D	A	A	.	.	.	G	V	L	W	L	E	E	P	F	D	A	G	A	L
Template Known Secondary structure		T	T		S						S	T	T	T	T	S	S																		S	S	S							T	T	T	T	T	T							T	T							T	.	.	.	T								S		T	T
Template Predicted Secondary structure																																																																	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.				.	.	.	.	.	.	.	.	230	.	.	.	.	.
		197	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure											.																		.	.
Query SS confidence											.																		.	.
Query Sequence		D	D	S	R	A	F	A	R	E	.	T	G	I	A	I	A	W	D	E	S	L	R	E	P	D	F	A	.	.	F	V	A	E	E	G	V	R	A	V	V	I	K	P	T	L	T	G	S	L	E	K	V	R	E	Q	V	Q	A	A	H	A	L	G	L	T	A	V	I	S	S	S	I	E	S	S	L	G	L	T	Q
Query Conservation											.																		.	.
Alig confidence											.																		.	.																																					.
Template Conservation																																																																			.
Template Sequence		A	A	H	A	A	L	A	G	R	G	A	R	V	R	I	A	G	G	E	A	A	H	N	F	H	M	A	Q	H	L	M	D	Y	G	R	I	G	F	I	Q	I	D	C	G	R	I	G	G	L	G	P	A	K	R	V	A	D	A	A	Q	A	R	G	I	T	.	Y	V	N	H	T	F	T	S	H	L	A	L	S	A
Template Known Secondary structure									T	T			S	S						T	T			S										T	S			S										T	S															T			.							S
Template Predicted Secondary structure																																																																			.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300		.	.	.	.	.	.	.	.	.	310	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.
Predicted Secondary structure																		.																		.
Query SS confidence																		.																		.
Query Sequence		L	A	R	I	A	A	W	L	T	P	D	T	I	P	G	L	.	D	T	L	D	L	M	Q	A	Q	Q	V	R	R	W	P	G	S	.	T	L	P	V	V	E	V	D
Query Conservation																		.																		.
Alig confidence																		.																		.
Template Conservation
Template Sequence		S	L	Q	P	F	A	G	L	E	A	D	R	I	C	E	Y	P	A	A	P	Q	Q	L	A	L	D	I	T	G	D	H	I	R	P	D	A	E	G	L	I	R	A	P
Template Known Secondary structure				G	G	G	T	T		T	T									S								T	B	S	S						T	T	S		B		S
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions