Job Description P29208 Confidence 100.00% Date Thu Jan 5 11:45:36 GMT 2012 Rank 62 Aligned Residues 309 % Identity 16% Template c2hxtA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:l-fuconate dehydratase; PDBTitle: crystal structure of l-fuconate dehydratase from xanthomonas2 campestris liganded with mg++ and d-erythronohydroxamate Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.									.
Query SS confidence																												.	.	.	.									.
Query Sequence		M	R	S	A	Q	V	Y	R	W	Q	I	P	M	D	A	G	V	V	L	R	D	R	R	L	K	T	.	.	.	.	R	D	G	L	Y	V	C	L	.	R	E	G	E	R	E	G	W	G	E	I	S	P	L	P	G	F	S	Q	E	T	W	E	E	A	Q	S	V	L	L	A	W	V	N	N	W	L	A	G	D	C
Query Conservation																												.	.	.	.									.
Alig confidence																												.	.	.	.									.																			.
Template Conservation																																																											.
Template Sequence		I	I	A	L	E	T	H	D	V	R	F	P	T	S	R	E	L	D	G	S	D	A	M	N	P	D	P	D	Y	S	A	A	Y	V	V	L	R	T	D	G	A	E	D	L	A	G	Y	G	L	V	F	T	I	G	R	G	N	.	D	V	Q	T	A	A	V	A	A	L	A	E	H	V	V	G	L	S	V	D	K	V
Template Known Secondary structure														G	G	G	T	T	T	T			S	S		S	S													S	S		T	T											S	T	T		.									T	T					T	T		B
Template Predicted Secondary structure																																																											.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		76	.	.	.	80	.	.																							.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	P	Q	M	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	F	G	V	S	C	A	L	A	E	L	T	D	T	L	P	Q	A	A	N	Y	R	A	A	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	D	L	G	A	F	A	R	R	L	T	N	D	S	Q	L	R	W	L	G	P	E	K	G	V	M	H	M	A	I	G	A	V	I	N	A	A	W	D	L	A	A	R	A	A	N	K	P	L	W	R	F	I	A	E	L	T	P	E	Q	L	V	D	T	I	D	F	R	Y	L	S	D	A	L	T	R	D	E	A
Template Known Secondary structure														T							T		S	S	S																						T	T	S	B							T	S												T	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
																																		110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																													.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																													.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	N	G	D	P	D	D	L	I	L	K	L	A	D	.	.	M	P	G	E	K	V	A	K	V	K	V	G	L	Y	E	A	V	R	D	G	M	V	V	N	L	L	L	E	.	A	I	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																													.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.														.															.
Template Conservation																																																															.
Template Sequence		L	A	I	L	R	D	A	Q	P	Q	R	A	A	R	T	A	T	L	I	E	Q	G	Y	P	A	Y	T	T	S	P	G	W	L	G	Y	S	D	E	K	L	V	R	L	A	K	E	A	V	A	D	G	F	R	T	I	K	L	K	V	G	A	.	N	V	Q	D	D	I	R	R	C	R	L	A	R	A	A	I	G	P
Template Known Secondary structure									G	G	G																							T	T	S															T	T		S								S	.																		S
Template Predicted Secondary structure																																																															.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.
Predicted Secondary structure																																										.	.												.																			.	.
Query SS confidence																																										.	.												.																			.	.
Query Sequence		D	L	H	L	R	L	D	A	N	R	A	W	T	P	L	K	G	Q	Q	F	A	K	Y	V	N	P	D	Y	R	D	R	I	A	F	L	E	E	P	C	K	.	.	T	R	D	D	S	R	A	F	A	R	E	.	T	G	I	A	I	A	W	D	E	S	L	R	E	P	D	F	A	F	.	.	V	A	E	E	G	V
Query Conservation																																										.	.												.																			.	.
Alig confidence																													.	.	.											.	.												.																			.	.
Template Conservation																													.	.	.
Template Sequence		D	I	A	M	A	V	D	A	N	Q	R	W	D	V	G	P	A	I	D	W	M	R	Q	L	A	E	F	.	.	.	D	I	A	W	I	E	E	P	T	S	P	D	D	V	L	G	H	A	A	I	R	Q	G	I	T	P	V	P	V	S	T	G	E	H	T	Q	N	R	V	V	F	K	Q	L	L	Q	A	G	A	V
Template Known Secondary structure		S	S							T	T													T	T	G	G	G	.	.	.			S						S		T	T													T	T	S						T	T			S											T
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.				.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.			.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		R	A	V	V	I	K	P	T	L	T	G	S	L	E	K	V	R	E	Q	V	Q	A	A	H	A	L	G	L	T	A	V	I	S	S	S	I	E	S	S	L	G	L	T	Q	L	A	R	I	A	A	W	L	T	P	D	T	I	P	G	L	D	T	L	D	L	.	.	M	Q	A	Q	Q	V	R	R	W	P	G	S	T
Query Conservation																																																																			.	.
Alig confidence																																																																			.	.
Template Conservation
Template Sequence		D	L	I	Q	I	D	A	A	R	V	G	G	V	N	E	N	L	A	I	L	L	L	A	A	K	F	G	V	R	V	F	P	H	A	G	G	V	G	L	C	E	L	V	Q	H	L	A	M	A	D	F	V	A	I	T	G	K	M	E	D	R	A	I	E	F	V	D	H	L	H	Q	H	F	L	D	P	V	R	I	Q
Template Known Secondary structure		S						T	T	T	S	S															T	T									S	T	T																T	T				T	T								S	S	G	G	G	B	S	S
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		308	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	V	V	E	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	G	R	Y	L	A	P
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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