Return to main results Retrieve Phyre Job Id

Job DescriptionP29208
Confidence100.00%DateThu Jan 5 11:45:36 GMT 2012
Rank54Aligned Residues304
% Identity14%Templatec2gl5A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:putative dehydratase protein; PDBTitle: crystal structure of putative dehydratase from salmonella thyphimurium
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.... .....40.........50.........60...
Predicted Secondary structure 








.













................
Query SS confidence 

































.




























. . . . . . . . . . . . . . . .
Query Sequence  MRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCL. REGEREGWGEISPLPGFSQETWEEAQSVL. . . . . . . . . . . . . . . .
Query Conservation 
  
 
    


  
          
  


 
.

 
  
 

 

 
    
        
................
Alig confidence 



















......







.




























................
Template Conservation 
  
       
        ......     
 
 
  
  
 

                  
 
 
 
          
Template Sequence  ITSIEVFDCELKKRDQTMSS. . . . . . YNPVLIRVNTDSGLSGIGEVGLAYGAGAKAGVGIIRDLAPLIVGEDPLNIEKIW
Template Known Secondary structure 

GGGT
GGGTT......


TTS
S
SSSTTGGGTTTS
TT
Template Predicted Secondary structure 









......
















Template SS confidence 















































































   3......10.........20.. .......30.........40.........50.........60.........70......
 
   64.....70.........80.........90.........100.........110... ......120.
Predicted Secondary structure 























......................
Query SS confidence 

















































. . . . . . . . . . . . . . . . . . . . . .







Query Sequence  LAWVNNWLAGDCELPQMPSVAFGVSCALAELTDTLPQAANYRAAPLCNGD. . . . . . . . . . . . . . . . . . . . . . PDDLILKL
Query Conservation                     
  


 

 

           
       ......................        
Alig confidence 

















































......................







Template Conservation    
                
  


 

 
   
  
 

  



     
  
 
                
      
Template Sequence  EFFFRKTFWGMGGGNVFYAGMSAIDIALWDIKGKYLGVPVYQLLGGKTNEKLRTYASQLQFGWGDKNHILVTPEEYAEAA
Template Known Secondary structure  SSSGGGS

TSBTTS
S
SS
GGG

TT

S


S
Template Predicted Secondary structure 






































Template SS confidence 















































































   77..80.........90.........100.........110.........120.........130.........140.........150......
 
   122. ......130....... ..140.........150. ........160.........170.....
Predicted Secondary structure  ..






.......................
.









Query SS confidence 

. .













. . . . . . . . . . . . . . . . . . . . . . .













.























Query Sequence  AD. . MPGEKVAKVKVGLY. . . . . . . . . . . . . . . . . . . . . . . EAVRDGMVVNLLLE. AIPDLHLRLDANRAWTPLKGQQFA
Query Conservation    ..  
    




  .......................    
   
   
 .   
  
 



  
    
    
Alig confidence 

..













.......................













.























Template Conservation        
    




                             
   
 


   
    
 



   
   

   
Template Sequence  RAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDADIIVEIHSLLGTNSAIQFA
Template Known Secondary structure  TT
S
SSSB
TTS
BTTTSS

GGGGS



SSS
TT
S
Template Predicted Secondary structure 










































Template SS confidence 















































































   157..160.........170.........180.........190.........200.........210.........220.........230......
 
   176...180.........190.... .....200.........210.........220... ......230.........240.........250.
Predicted Secondary structure 










..










..











Query SS confidence 


















. .




























. .



























Query Sequence  KYVNPDYRDRIAFLEEPCK. . TRDDSRAFARETGIAIAWDESLREPDFAF. . VAEEGVRAVVIKPTLTGSLEKVREQVQA
Query Conservation    
       
   
 
  ..       
      


 


        ..      
 
 

    


  
      
Alig confidence 





...









..




























..



























Template Conservation    
   ... 
  



    
      
     



 

           
     
 
  
    



        
Template Sequence  KAIEKY. . . RIFLYEEPIHPLNSDNMQKVSRSTTIPIATGERSYTRWGYRELLEKQSIAVAQPDLCLCGGITEGKKICDY
Template Known Secondary structure  GGG...

SS
SS

SS

TT

TTTT

S


TTTTT
Template Predicted Secondary structure 
...






























Template SS confidence 















































































   237..240.. .......250.........260.........270.........280.........290.........300.........310...
 
   252.......260.........270.........280.........290.... .....300.........310....
Predicted Secondary structure 



















..














Query SS confidence 










































. .



















Query Sequence  AHALGLTAVISSSIESSLGLTQLARIAAWLTPDTIPGLDTLDL. . MQAQQVRRWPGSTLPVVEVD
Query Conservation 
   

   

   

 

  
   


        



   ..   
          
     
Alig confidence 












.




























..



















Template Conservation 
   

    
  . 
 
   
  

 

       
                      
    
Template Sequence  ANIYDTTVQVHVC. GGPVSTVAALHMETAIPNFIIHEHHTNAMKASIRELCTHDYQPENGYYVAP
Template Known Secondary structure  TTT





.SS
TTB

TTTT
TTBSS



BTT


Template Predicted Secondary structure 






.

























Template SS confidence 
































































   314.....320...... ...330.........340.........350.........360.........370.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions