Job Description P29208 Confidence 100.00% Date Thu Jan 5 11:45:36 GMT 2012 Rank 32 Aligned Residues 296 % Identity 17% Template c2fkpC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:n-acylamino acid racemase; PDBTitle: the mutant g127c-t313c of deinococcus radiodurans n-2 acylamino acid racemase Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																				.																.	.																									.	.	.	.
Query SS confidence																																				.																.	.																									.	.	.	.
Query Sequence		M	R	S	A	Q	V	Y	R	W	Q	I	P	M	D	A	G	V	V	L	R	D	R	R	L	K	T	R	D	G	L	Y	V	C	L	.	R	E	G	E	R	E	G	W	G	E	I	S	P	L	P	.	.	G	F	S	Q	E	T	W	E	E	A	Q	S	V	L	L	A	W	V	N	N	W	L	A	G	.	.	.	.
Query Conservation																																				.																.	.																									.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.							.																.	.																									.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	A	A	E	I	V	V	A	R	L	P	L	K	T	H	K	.	.	.	.	.	.	.	.	.	.	.	V	V	P	L	L	I	L	H	G	E	G	V	Q	G	V	A	E	G	T	M	E	A	R	P	M	Y	R	E	E	T	I	A	G	A	L	D	L	L	R	G	T	F	L	P	A	I	L	G	Q	T	F	A
Template Known Secondary structure														B					.	.	.	.	.	.	.	.	.	.	.										T	T										B	S	S	S	S	S	S	S		B											T						T	T				S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.												.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
										74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.													.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence		.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		.	.	.	.	.	.	.	.	D	C	E	L	P	Q	M	P	S	V	A	F	G	V	S	C	A	L	A	E	L	T	D	T	L	P	Q	A	A	N	Y	R	A	A	P	.	.	.	.	.	.	.	.	.	.	.	.	L	C	N	G	D	P	D	D	L	I	L	K	L	A	D	.	.	M	P	G	E	K	V	A	K
Query Conservation		.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence		.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		N	P	E	A	V	S	D	A	L	G	S	Y	R	G	N	R	M	A	R	A	M	V	E	M	A	A	W	D	L	W	A	R	T	L	G	V	P	L	C	T	L	L	G	G	H	K	E	Q	V	E	V	G	V	S	L	G	I	Q	A	D	E	Q	A	T	V	D	L	V	R	R	H	V	E	Q	G	Y	R	R	I	K
Template Known Secondary structure		S								T		S			S																					T		B						T				S				B								S	S													T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		V	K	V	G	L	Y	E	A	V	R	D	G	M	V	V	N	L	L	L	E	A	I	P	D	L	H	L	R	L	D	A	N	R	A	W	T	P	L	K	G	Q	Q	F	A	K	Y	V	N	P	D	Y	R	D	R	I	A	F	L	E	E	P	C	K	T	.	.	R	D	D	S	R	A	F	A	R	E	T	G	I	A
Query Conservation																																																																		.	.
Alig confidence							.	.	.																																				.							.	.	.												.	.
Template Conservation							.	.	.																																				.							.	.	.
Template Sequence		L	K	I	K	P	.	.	.	G	W	D	V	Q	P	V	R	A	T	R	E	A	F	P	D	I	R	L	T	V	D	A	N	S	A	Y	T	L	A	D	A	G	R	L	.	R	Q	L	D	E	Y	.	.	.	D	L	T	Y	I	E	Q	P	L	A	W	D	D	L	V	D	H	A	E	L	A	R	R	I	R	T	P
Template Known Secondary structure					B	T	.	.	.	T	B	S												S	S	S							T	T				G	G	G					.		G	G	G	G	G	.	.	.			S						S		T	T		S											S	S
Template Predicted Secondary structure							.	.	.																																				.							.	.	.
Template SS confidence
		169	170	.	.	.				.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.				.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		I	A	W	D	E	S	L	R	E	P	D	F	A	.	.	F	V	A	E	E	G	V	R	A	V	V	I	K	P	T	L	T	G	S	L	E	K	V	R	E	Q	V	Q	A	A	H	A	L	G	L	T	A	V	I	S	S	S	I	E	S	S	L	G	L	T	Q	L	A	R	I	A	A	W	L	T	P	D	T	I	P
Query Conservation															.	.
Alig confidence															.	.
Template Conservation
Template Sequence		L	C	L	D	E	S	V	A	S	A	S	D	A	R	K	A	L	A	L	G	A	G	G	V	I	N	L	K	V	A	R	V	G	G	H	A	E	S	R	R	V	H	D	V	A	Q	S	F	G	A	P	V	W	C	G	G	M	L	E	S	G	I	G	R	A	H	N	I	H	L	S	C	L	S	N	F	R	L	P	G
Template Known Secondary structure					S	T	T			S											T	S		S						T	T	T	T	T	S														T	T																						T	T	S	T	T	B		S		B
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		288	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		G	L	D	.	T	L	D	L	M	Q	A	Q	Q	V	R	R	W	P	G	S	T	L	P	V	V	E	V	D
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		D	T	S	S	A	S	R	Y	W	E	R	D	L	I	Q	E	P	L	E	A	V	D	G	L	M	P	V	P
Template Known Secondary structure		S				G	G	G	T	B	S	S		S	B	S	S					B	T	T
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions