Job Description P29208 Confidence 100.00% Date Thu Jan 5 11:45:36 GMT 2012 Rank 25 Aligned Residues 307 % Identity 18% Template c1wufB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein lin2664; PDBTitle: crystal structure of protein gi:16801725, member of enolase2 superfamily from listeria innocua clip11262 Resolution 2.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																				.													.	.																													.	.	.
Query SS confidence																																				.													.	.																													.	.	.
Query Sequence		M	R	S	A	Q	V	Y	R	W	Q	I	P	M	D	A	G	V	V	L	R	D	R	R	L	K	T	R	D	G	L	Y	V	C	L	.	R	E	G	E	R	E	G	W	G	E	I	S	.	.	P	L	P	G	F	S	Q	E	T	W	E	E	A	Q	S	V	L	L	A	W	V	N	N	W	L	A	G	D	.	.	.
Query Conservation																																				.													.	.																													.	.	.
Alig confidence																																				.													.	.																													.	.	.
Template Conservation
Template Sequence		F	Q	K	A	R	L	I	H	A	E	L	P	L	L	A	P	F	K	T	S	Y	G	E	L	K	S	K	D	F	Y	I	I	E	L	I	N	E	E	G	I	H	G	Y	G	E	L	E	A	F	P	L	P	D	Y	T	E	E	T	L	S	S	A	I	L	I	I	K	E	Q	L	L	P	L	L	A	Q	R	K	I	R
Template Known Secondary structure																					T	T																S	S	S											S	S	T	T	S	S	S													T	T										S
Template Predicted Secondary structure
Template SS confidence
		2003	.	.	.	.	.	.	2010	.	.	.	.	.	.	.	.	.	2020	.	.	.	.	.	.	.	.	.	2030	.	.	.	.	.	.	.	.	.	2040	.	.	.	.	.	.	.	.	.	2050	.	.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.	.
											75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.													.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		.	.	.	.	.	.	.	.	.	C	E	L	P	Q	M	P	S	V	A	F	G	V	S	C	A	L	A	E	L	T	D	T	L	P	Q	A	A	N	Y	R	A	A	P	.	.	.	.	.	.	.	.	.	.	.	.	L	C	N	G	D	P	D	D	L	I	L	K	L	A	D	.	.	M	P	G	E	K	V	A	K
Query Conservation		.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		K	P	E	E	I	Q	E	L	F	S	W	I	Q	G	N	E	M	A	K	A	A	V	E	L	A	V	W	D	A	F	A	K	M	E	K	R	S	L	A	K	M	I	G	A	T	K	E	S	I	K	V	G	V	S	I	G	L	Q	Q	N	V	E	T	L	L	Q	L	V	N	Q	Y	V	D	Q	G	Y	E	R	V	K
Template Known Secondary structure		S	T	T						T	T	T	S		S																				T	T	S	B					T	T				S				B								S																T
Template Predicted Secondary structure
Template SS confidence
		2083	.	.	.	.	.	.	2090	.	.	.	.	.	.	.	.	.	2100	.	.	.	.	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.	2120	.	.	.	.	.	.	.	.	.	2130	.	.	.	.	.	.	.	.	.	2140	.	.	.	.	.	.	.	.	.	2150	.	.	.	.	.	.	.	.	.	2160	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		V	K	V	G	L	Y	E	A	V	R	D	G	M	V	V	N	L	L	L	E	A	I	P	D	L	H	L	R	L	D	A	N	R	A	W	T	P	L	K	G	Q	Q	F	A	K	Y	V	N	P	D	Y	R	D	R	I	A	F	L	E	E	P	C	K	T	.	.	R	D	D	S	R	A	F	A	R	E	T	G	I	A
Query Conservation																																																																		.	.
Alig confidence							.	.	.																																				.							.	.	.												.	.
Template Conservation							.	.	.																																				.							.	.	.
Template Sequence		L	K	I	A	P	.	.	.	N	K	D	I	Q	F	V	E	A	V	R	K	S	F	P	K	L	S	L	M	A	D	A	N	S	A	Y	N	R	E	D	F	L	L	L	.	K	E	L	D	Q	Y	.	.	.	D	L	E	M	I	E	Q	P	F	G	T	K	D	F	V	D	H	A	W	L	Q	K	Q	L	K	T	R
Template Known Secondary structure					B	T	.	.	.	T	B	S									T	T		T	T	S							T	T				G	G	G					.					T	T	.	.	.	T		S						S		S	S		S								T	T		S	S
Template Predicted Secondary structure							.	.	.																																				.							.	.	.
Template SS confidence
		2163	.	.	.	.				.	.	2170	.	.	.	.	.	.	.	.	.	2180	.	.	.	.	.	.	.	.	.	2190	.	.	.	.	.	.	.	.	.	2200	.	.		.	.	.	.	.	.				.	2210	.	.	.	.	.	.	.	.	.	2220	.	.	.	.	.	.	.	.	.	2230	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		I	A	W	D	E	S	L	R	E	P	D	F	A	.	.	F	V	A	E	E	G	V	R	A	V	V	I	K	P	T	L	T	G	S	L	E	K	V	R	E	Q	V	Q	A	A	H	A	L	G	L	T	A	V	I	S	S	S	I	E	S	S	L	G	L	T	Q	L	A	R	I	A	A	W	L	T	P	D	T	I	P
Query Conservation															.	.
Alig confidence															.	.
Template Conservation
Template Sequence		I	C	L	D	E	N	I	R	S	V	K	D	V	E	Q	A	H	S	I	G	S	C	R	A	I	N	L	K	L	A	R	V	G	G	M	S	S	A	L	K	I	A	E	Y	C	A	L	N	E	I	L	V	W	C	G	G	M	L	E	A	G	V	G	R	A	H	N	I	A	L	A	A	R	N	E	F	V	F	P	G
Template Known Secondary structure						T	T			S											T			S						T	G	G	G	T	S														T	T																							T	S	S	S			S		B
Template Predicted Secondary structure
Template SS confidence
		2236	.	.	.	2240	.	.	.	.	.	.	.	.	.	2250	.	.	.	.	.	.	.	.	.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.	.	2310	.	.	.	.	.
		288	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		G	L	D	.	T	L	D	L	M	Q	A	Q	Q	V	R	R	W	P	G	S	T	L	P	V	V	E	V	D
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		D	I	S	A	S	N	R	F	F	A	E	D	I	V	T	P	A	F	E	L	N	Q	G	R	L	K	V	P
Template Known Secondary structure		S				G	G	G	T	B	S	S		S	B	S	S						S	S
Template Predicted Secondary structure
Template SS confidence
		2316	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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