Job Description P29208 Confidence 100.00% Date Thu Jan 5 11:45:36 GMT 2012 Rank 48 Aligned Residues 311 % Identity 14% Template c1rvkA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:isomerase/lactonizing enzyme; PDBTitle: crystal structure of enolase agr_l_2751 from agrobacterium tumefaciens Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																							.	.	.	.														.																																								.	.
Query SS confidence																							.	.	.	.														.																																								.	.
Query Sequence		M	R	S	A	Q	V	Y	R	W	Q	I	P	M	D	A	G	V	V	L	R	D	.	.	.	.	R	R	L	K	T	R	D	G	L	Y	V	C	L	.	R	E	G	E	R	E	G	W	G	E	I	S	P	L	P	G	F	S	Q	E	T	W	E	E	A	Q	S	V	L	L	A	W	V	N	N	W	L	A	G	.	.
Query Conservation																							.	.	.	.														.																																								.	.
Alig confidence																							.	.	.	.														.																																								.	.
Template Conservation
Template Sequence		I	T	D	V	E	V	R	V	F	R	T	T	T	R	R	H	S	D	S	A	G	H	A	H	P	G	P	A	H	Q	V	E	Q	A	X	L	T	V	R	T	E	D	G	Q	E	G	H	S	F	T	A	P	E	I	V	R	P	H	V	I	E	K	F	V	K	K	V	L	I	G	E	D	H	R	D	R	E	R	L	W
Template Known Secondary structure																				T	T	S																				T	T	S									G	G	G	G								T						T	T	S	B	T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
										74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.																				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence		.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		.	.	.	.	.	.	.	.	D	C	E	L	P	Q	M	P	S	V	A	F	G	V	S	C	A	L	A	E	L	T	D	T	L	P	Q	A	A	N	Y	R	A	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	C	N	G	D	P	D	D	L	I	L	K	L	A	D	.	.	M
Query Conservation		.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence		.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		Q	D	L	A	H	W	Q	R	G	S	A	A	Q	L	T	D	R	T	L	A	V	V	D	C	A	L	W	D	L	A	G	R	S	L	G	Q	P	V	Y	K	L	I	G	G	Y	R	D	K	V	L	A	Y	G	S	I	X	C	G	D	E	L	E	G	G	L	A	T	P	E	D	Y	G	R	F	A	E	T	L	V	K
Template Known Secondary structure									T	T	T	T	T		S																					T		B								S		S															T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		125	.	.	.	.	130	.	.	.	.	.							.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.
Predicted Secondary structure													.	.	.	.	.	.																	.																																												.	.
Query SS confidence													.	.	.	.	.	.																	.																																												.	.
Query Sequence		P	G	E	K	V	A	K	V	K	V	G	.	.	.	.	.	.	L	Y	E	A	V	R	D	G	M	V	V	N	L	L	L	E	.	A	I	P	D	L	H	L	R	L	D	A	N	R	A	W	T	P	L	K	G	Q	Q	F	A	K	Y	V	N	P	D	Y	R	D	R	I	A	F	L	E	E	P	C	K	.	.	T
Query Conservation													.	.	.	.	.	.																	.																																												.	.
Alig confidence													.	.	.	.	.	.																	.																															.	.	.											.	.
Template Conservation																																																																		.	.	.
Template Sequence		R	G	Y	K	G	I	K	L	H	T	W	X	P	P	V	S	W	A	P	D	V	K	X	D	L	K	A	C	A	A	V	R	E	A	V	G	P	D	I	R	L	X	I	D	A	F	H	W	Y	S	R	T	D	A	L	A	L	G	R	G	L	E	K	L	.	.	.	G	F	D	W	I	E	E	P	X	D	E	Q	S
Template Known Secondary structure			T		S									T	T	S	T	T																				T	T	S								T	T															T	T	.	.	.	T		S						S		T	T
Template Predicted Secondary structure																																																																		.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.				.	.	.	230	.	.	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		R	D	D	S	R	A	F	A	R	E	T	G	I	A	I	A	W	D	E	S	L	R	E	P	D	F	A	F	.	.	.	V	A	E	E	G	V	R	A	V	V	I	K	P	T	L	T	G	S	L	E	K	V	R	E	Q	V	Q	A	A	H	A	L	G	L	T	A	V	I	S	S	S	I	E	S	S	L	G	L	T
Query Conservation																														.	.	.
Alig confidence																														.	.	.
Template Conservation
Template Sequence		L	S	S	Y	K	W	L	S	D	N	L	D	I	P	V	V	G	P	E	S	A	A	G	K	H	W	H	R	A	E	W	I	K	A	G	A	C	D	I	L	R	T	G	V	N	D	V	G	G	I	T	P	A	L	K	T	X	H	L	A	E	A	F	G	X	E	C	E	V	H	G	N	T	A	X	N	L	H	V	V
Template Known Secondary structure													S	S						S	S		S	S											T	T			S										T	S														T	T									S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		Q	L	A	R	I	A	A	W	L	T	P	D	T	I	P	G	L	.	D	T	L	D	L	M	Q	A	Q	Q	V	R	R	W	P	G	S	T	L	P	V	V	E	V	D
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		A	A	T	K	N	C	R	W	Y	E	R	G	L	L	H	P	F	L	E	Y	D	D	G	H	D	Y	L	K	S	L	S	D	P	X	D	R	D	G	F	V	H	V	P
Template Known Secondary structure					S	S											T	T	S		G	G	G			T	T	B	S	S		S	S		B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions