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Job DescriptionP29208
Confidence27.93%DateThu Jan 5 11:45:36 GMT 2012
Rank297Aligned Residues203
% Identity15%Templatec1kbiB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:cytochrome b2; PDBTitle: crystallographic study of the recombinant flavin-binding domain of2 baker's yeast flavocytochrome b2: comparison with the intact wild-3 type enzyme
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   88.90.........100.........110.........120.........130.........140.........150..... ....160......
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Query Sequence  SCALAELTDTLPQAANYRAAPLCNGDPDDLILKLADMPGEKVAKVKVGLYEAVRDGMVVNLLLEAIPD. LHLRLDANRAW
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Template Sequence  EKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVN. SDRKITDDLVKNVEKLGVKALFVTVDAPSLG
Template Known Secondary structure  SSSS



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   209210.........220.........230.........240.........250...... ...260.........270.........280.......
 
   167..170........ .180.........190.........200.........210.........220.........230.... .
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Query Sequence  TPLKGQQFAKYV. . . . . . . NPDYRDRIAFLEEPCKTRDDSRAFARETGIAIAWDESLREPDFAFVAEEGVRAVVI. . . . K
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Template Sequence  QREKDMKLKFSNTKTNVEESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGG
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   288.290.........300.........310.........320.........330.........340.........350.........360.......
 
   236...240.........250.... .....260.........270.........280.........290......
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Query Sequence  PTLTGSLEKVREQVQAAHA. . . . . . . LGLTAVISSSIESSLGLTQLARIAAWLTPDTIPGLDTLDLMQ
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Template Sequence  RQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAK. . . . . GVGLGRPFLYA
Template Known Secondary structure  TSSTT


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   376...380.........390.........400.........410.........420....... ..430........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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