|   |
181 | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | |
. | . | 250 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | I | A | V | L | R | R | A | G | E | I | T | A | M | A | H | T | R | A | M | E | K | C | R | P | G | M | F | E | Y | H | L | E | G | E | I | H | H | E | F | N | R | H | G | A | R | Y | P | S | Y | N | T | I | V | G | S | G | E | N | G | C | I | L | H | Y | T | E | . |
N | E | C | E | M | R | D | G | D | L | V | L |
Query Conservation |   |
|
|   |   |
|
|   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   | . |   |   |   |   |
|   |   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |
Template Sequence |   |
D | T | E | K | L | M | K | A | G | E | I | A | K | K | V | R | E | K | A | I | K | L | A | R | P | G | M | L | L | L | E | L | A | E | S | I | E | K | M | I | M | E | L | G | G | . |
K | P | A | F | P | V | N | L | S | I | N | E | I | A | A | H | Y | T | P | Y | K | G | D | T | T | V | L | K | E | G | D | Y | L | K |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| T | T |
| B |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . |  |  | S | S |
|
|  |  |  |  | T | T |
|
| S |
|
|
|
|
| T | T |
|
|
| B |
|
| T | T |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | D | A | G | C | E | Y | K | G | Y | A | G | D | I | T | R | T | F | P | V | N | G | K | F | T | Q | A | Q | R | E | I | Y | D | I | V | L | E | S | L | E | T | S | L | R | L | Y | R | P | G | T | S | I | L | E | V | T | G | E | V | V | R | I | M | V | S | G | L | V | K | L | G | I | L | K | G | D | V | D | E | L |
Query Conservation |   |
  |
|   |
|   |   |   |   |
|
|   |
|
|   |   |
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|
|   |
|   |   |   |   |
|
|   |
|
|   |   |
|
|   |   |   | . |
|   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
I | D | V | G | V | H | I | D | G | F | I | A | D | T | A | V | T | V | R | V | . |
G | M | E | E | D | . |
. |
. |
E | L | M | E | A | A | K | E | A | L | N | A | A | I | S | V | A | R | A | G | V | E | I | K | E | L | G | K | A | I | E | N | E | I | R | K | R | G | F | K | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  | T | . | T | S |
|
|
| . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | T | T |
| B | T |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  | . |
|
|
|  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | |
. | . | . | . | . | |
|
|
. | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
  |
  |   |
340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | |
. | 360 | . | . | . | . | . | . | . | |
|
|
|
. | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | Q | N | A | H | R | P | F | F | M | H | G | L | S | H | W | L | G | . |
L | D | V | H | D | V | G | V | Y | . |
. |
. |
. |
G | Q | D | R | S | R | I | L | E | P | G | M | V | L | T | V | E | P | G | L | Y | I | A | P | D | A | E | V | P | E | Q | Y | R | G | I | G | I | R | I | E | D | D | I | V | I | T | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
| . |
|   |   |   |
|   |
|   |
| . | . | . | . |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|   |
|
|
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . |   |   |   |   |   |
|
|
|
|
|   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|
|
|   |
|   |   |   |   |   |   | . | . | . | . | . | . | . |
|   |   |   |
|   |
|
|   |
|
|
|
|   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | V | N | L | S | G | H | K | I | E | R | Y | K | L | H | A | G | I | S | I | P | N | I | Y | R | P | H | D | N | Y | V | L | K | E | G | D | V | F | A | I | E | P | F | A | T | I | G | A | R | N | . |
. |
. |
. |
. |
. |
. |
G | I | V | A | Q | F | E | H | T | I | I | V | E | K |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . |
| T | T |
|
|  |  |  |
| B | T | T | B | S | S |
| S |
|  |  |
| S | S |
|
| T | T |
|
|
| B |
|
| T | T |
|  |  |  |  |
|
|  |  |  | S |
|
|
|
| . | . | . | . | . | . | . |
|
|  |  |  |
| B |  |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |
|
|
|
| . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
  |
  |   |
415 | . | . | . | . | 420 | . | . |
Predicted Secondary structure |   |
|
|
|  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
T | G | N | E | N | L | T | A |
Query Conservation |   |
  |
|   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|
|   |
Template Sequence |   |
D | S | V | I | V | T | T | E |
Template Known Secondary structure |   |
S | S |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
|
|
|  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
288 | . | 290 | . | . | . | . | . |
  |