Return to main results Retrieve Phyre Job Id

Job DescriptionP15034
Confidence100.00%DateThu Jan 5 11:34:21 GMT 2012
Rank11Aligned Residues350
% Identity29%Templatec3q6dA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:proline dipeptidase; PDBTitle: xaa-pro dipeptidase from bacillus anthracis.
Resolution1.97 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.........70.........80.........
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  QRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLTAEIW
Query Conservation    
  

   
       
          
    
   


 



       
             
     
      
Alig confidence 























..............



















.....













...
Template Conservation    

 

   
     

 

   .............. 
  



       

   .....    
         ...
Template Sequence  MEKIERLRSAFDEAGIDGILLTNE. . . . . . . . . . . . . . HSRRYMANFTGTAGVVLISK. . . . . KRAQFITDFRYVEQ. . .
Template Known Secondary structure  TTT
S

..............


SSS
S.....S

GGG...
Template Predicted Secondary structure 




..............








.....


...
Template SS confidence 















































































   1........10.........20.... .....30.........40.... .....50........
 
   90.........100.........110.........120.........130.........140.........150.........160.........
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  FGRRLGQDAAPEKLGVDRALAFSEINQQLYQLLNGLDVVYHAQGEYAYADVIVNSALEKLRKGSRQNLTAPATMIDWRPV
Query Conservation                                                                            

    
Alig confidence  ........






































..........






















Template Conservation  ........                    
   
       
 
    ..........                       
Template Sequence  . . . . . . . . ASKQAVGYEIVQHAGLIIDEVAKQVKELGIQKLGFEQDT. . . . . . . . . . LTYSSYSAHKEAIDAEFIPTSGL
Template Known Secondary structure  ........STTS
SS
T
STTT..........S


S
S
Template Predicted Secondary structure  ........













..........









Template SS confidence 















































































   5960.........70.........80.........90....... ..100.........110.........120
 
   170.........180.........190.........200.........210.........220.........230.........240.........
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  VHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGARYPSYNTIVGSGENGCILHYTENE
Query Conservation 
  

 


  

  

 

 
   
       
  
  
 

           
        

  
      
     
Alig confidence 















































































Template Conservation 
  

 


  

   
 
              
  
 

 

           
            
            
Template Sequence  VEKLRLIKTDSEIKILKEAAQIADAAFEHILSFIRPGVSEIEVSNELEFFMRKQGATSSSFDIIVASGLRSALPHGVASE
Template Known Secondary structure  TS

TTT

TT
BTT
SSS

GGGGG
TT
B

S
Template Predicted Secondary structure 
































Template SS confidence 















































































   121........130.........140.........150.........160.........170.........180.........190.........200
 
   250.........260.........270.........280.........290.........300.........310.........320.........
Predicted Secondary structure 




















Query SS confidence 















































































Query Sequence  CEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKL
Query Conservation    
  

 
  
 
    

 

  

  
 
                       



     
               
Alig confidence 





























.















































.
Template Conservation    
  

   

 
    

  
  

   .
                         

    

           
  .
Template Sequence  KVIETGDFVTLDFGAYYKGYCSDITRTIAV. GEPSDKLKEIYNIVLEAQLRGVNGIKAGLTGREADALTRDYITEKGYG.
Template Known Secondary structure 
B

TT

TT

S.S




TT
BTT
G.
Template Predicted Secondary structure 









.













.
Template SS confidence 















































































   201........210.........220.........230 .........240.........250.........260.........270........
 
   330.........340.........350.........360.........370.........380.........390.........400.........
Predicted Secondary structure 


























































Query SS confidence 















































































Query Sequence  GILKGDVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAPDAEVPEQYRGIGIRIEDD
Query Conservation                       
  





   
 
 
       
  


 






              
 




Alig confidence  .................














































.........






Template Conservation  .................       

 


   
 
 
       
  


  


        .........


 

 
Template Sequence  . . . . . . . . . . . . . . . . . EYFGHSTGHGIGLEIHEAPGLAFRSDTVLEPGMAVTVEPGIYIPGIG. . . . . . . . . GVRIEDD
Template Known Secondary structure  .................GG

S
S
SSSSSSTT


B

TT


TTT.........
B
Template Predicted Secondary structure  .................




































.........
Template SS confidence 















































































   279280.........290.........300.........310.........320..... ....330..
 
   410.........420........
Predicted Secondary structure 












Query SS confidence 


















Query Sequence  IVITETGNENLTASVVKKP
Query Conservation 
 


 
 
 

   
   
Alig confidence 












.




Template Conservation    

  
 
 

 . 
  
Template Sequence  IIVTSEGNEVITK. SPKEL
Template Known Secondary structure 
SSS


.S

S
Template Predicted Secondary structure 







.




Template SS confidence 


















   333......340..... ....350
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions