Job Description P15034 Confidence 100.00% Date Thu Jan 5 11:34:21 GMT 2012 Rank 27 Aligned Residues 238 % Identity 20% Template c2v6cA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:proliferation-associated protein 2g4; PDBTitle: crystal structure of erbb3 binding protein 1 (ebp1) Resolution 2.50 Å

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		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.											.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.																.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.																.
Query Sequence		R	L	F	K	S	P	E	E	I	A	V	L	R	R	A	G	E	I	T	A	M	A	H	T	R	A	M	E	K	C	R	P	G	M	F	E	Y	H	L	E	G	E	I	H	H	E	F	N	R	H	G	A	R	Y	.	.	.	.	.	.	.	.	.	.	P	S	Y	N	T	I	V	G	S	G	E	N	G	C	I	.
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.																.
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		Q	T	I	A	E	D	L	V	V	T	K	Y	K	M	G	G	D	I	A	N	R	V	L	R	S	L	V	E	A	S	S	S	G	V	S	V	L	S	L	C	E	K	G	D	A	M	I	M	E	E	T	G	K	I	F	K	K	E	K	E	M	K	K	G	I	A	F	P	T	S	I	S	V	N	N	C	V	C	H	F
Template Known Secondary structure				T	T	S																							T	T			T	T		B																	T	T	S		T	T		T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
			243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.						.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure		.																																										.	.	.	.	.
Query SS confidence		.																																										.	.	.	.	.
Query Sequence		.	L	H	Y	T	E	N	E	C	E	M	R	D	G	D	L	V	L	I	D	A	G	C	E	Y	K	G	Y	A	G	D	I	T	R	T	F	P	V	N	G	K	F	.	.	.	.	.	T	Q	A	Q	R	E	I	Y	D	I	V	L	E	S	L	E	T	S	L	R	L	Y	R	P	G	T	S	I	L	E	V	T	G
Query Conservation		.																																										.	.	.	.	.
Alig confidence		.																																						.				.	.	.	.	.
Template Conservation																																								.
Template Sequence		S	P	L	K	S	D	Q	D	Y	I	L	K	E	G	D	L	V	K	I	D	L	G	V	H	V	D	G	F	I	A	N	V	A	H	T	F	V	I	.	G	V	A	Q	G	T	Q	V	T	G	R	K	A	D	V	I	K	A	A	H	L	C	A	E	A	A	L	R	L	V	K	P	G	N	Q	N	T	Q	V	T	E
Template Known Secondary structure					S	S	S				B			T	T												T	T											T	.	T			T	T			B		T																					S	T	T		B
Template Predicted Secondary structure																																								.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.											.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	V	V	R	I	M	V	S	G	L	V	K	L	G	I	L	K	G	D	V	D	E	L	I	A	Q	N	A	H	R	P	F	F	M	H	G	L	S	H	W	L	G	L	D	V	H	D	.	.	.	.	.	.	.	.	.	.	V	G	V	Y	G	Q	D	R	S	R	I	L	E	P	G	M	V	L	T	V	E	P	G
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	W	N	K	V	A	H	S	F	N	C	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	G	M	L	S	H	Q	L	K	Q	H	V	I	D	G	E	K	T	I	I	Q	N	P	T	D	Q	Q	K	K	D	H	E	K	A	E	F	E	V	H	E	V	Y	A	V	D	V	L
Template Known Secondary structure										T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T							B	T	T	B	S	S		S	S				S	S									S				B			T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.																				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		387	.	.	390	.	.	.	.	.																																																																							.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	I	A	P	D	A	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	S	S	G	E	G	K	A	K	D	A	G	Q	R	T	T	I	Y	K	R	D	P	S	K	Q	Y	G	L	K	M	K	T	S	R	A	F	F	S	E	V	E	R	R	F	D	A	M	P	F	A	L	R	A	F	E	D	E	K	K	A	R	M	G	V	V	E	C	A	K	H	E	L	L	Q	P	F	N	V	L	Y
Template Known Secondary structure				S	S								S										T	T							S														T	T	T	S				G	G	G	S	S															T	T	S
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	Y	R	G	I	G	I	R	I	E	D	D	I	V	I	T	E	T	G	N	E	N	L	T	A	S	V	V	K	K	P	E	E	I	E
Query Conservation
Alig confidence																											.
Template Conservation																											.
Template Sequence		E	R	E	G	E	F	V	A	Q	F	K	F	T	V	L	L	M	P	N	G	P	M	R	I	T	.	S	G	P	F	E	P	D	L	Y	K
Template Known Secondary structure				T	T														T	T							.						G	G	G	B
Template Predicted Secondary structure																											.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions