Job Description P15034 Confidence 100.00% Date Thu Jan 5 11:34:21 GMT 2012 Rank 30 Aligned Residues 216 % Identity 26% Template c1xgnB_ PDB info PDB header:aminopeptidase Chain: B: PDB Molecule:methionine aminopeptidase; PDBTitle: methionine aminopeptidase from hyperthermophile pyrococcus2 furiosus Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.				.	250	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.
Query SS confidence																																																																						.	.	.
Query Sequence		E	I	A	V	L	R	R	A	G	E	I	T	A	M	A	H	T	R	A	M	E	K	C	R	P	G	M	F	E	Y	H	L	E	G	E	I	H	H	E	F	N	R	H	G	A	R	Y	P	S	Y	N	T	I	V	G	S	G	E	N	G	C	I	L	H	Y	T	E	N	.	.	.	E	C	E	M	R	D	G	D	L
Query Conservation																																																																						.	.	.
Alig confidence																																															.										.	.												.	.	.
Template Conservation																																															.										.	.
Template Sequence		D	T	E	K	L	M	K	A	G	E	I	A	K	K	V	R	E	K	A	I	K	L	A	R	P	G	M	L	L	L	E	L	A	E	S	I	E	K	M	I	M	E	L	G	G	.	K	P	A	F	P	V	N	L	S	.	.	I	N	E	I	A	A	H	Y	T	P	Y	K	G	D	T	T	V	L	K	E	G	D	Y
Template Known Secondary structure																						T	T			S	S		B															T	T		.			S	S						.	.		T	T									S	S				B			T	T
Template Predicted Secondary structure																																															.										.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	I	D	A	G	C	E	Y	K	G	Y	A	G	D	I	T	R	T	F	P	V	N	G	K	F	T	Q	A	Q	R	E	I	Y	D	I	V	L	E	S	L	E	T	S	L	R	L	Y	R	P	G	T	S	I	L	E	V	T	G	E	V	V	R	I	M	V	S	G	L	V	K	L	G	I	L	K	G	D	V	D
Query Conservation
Alig confidence																								.				.	.	.																																												.	.	.	.	.	.	.	.
Template Conservation																								.				.	.	.																																												.	.	.	.	.	.	.	.
Template Sequence		L	K	I	D	V	G	V	H	I	D	G	F	I	A	D	T	A	V	T	V	R	V	.	G	M	E	.	.	.	E	D	E	L	M	E	A	A	K	E	A	L	N	A	A	I	S	V	A	R	A	G	V	E	I	K	E	L	G	K	A	I	E	N	E	I	R	K	R	G	F	K	P	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T											T	.	T	S		.	.	.																					T	T		B														T	T	T				.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.				.	.	.																																												.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.	.	.	.	.	.	.					.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																							.										.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.										.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	I	A	Q	N	A	H	R	P	F	F	M	H	G	L	S	H	W	L	G	.	L	D	V	H	D	V	G	V	Y	.	.	.	.	G	Q	D	R	S	R	I	L	E	P	G	M	V	L	T	V	E	P	G	L	Y	I	A	P	D	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.										.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.											.										.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	I	V	N	L	S	G	H	K	I	E	R	Y	K	L	H	A	G	I	S	I	P	N	I	Y	R	P	H	D	N	Y	V	L	K	E	G	D	V	F	A	I	E	P	F	A	T	I	G	A	G	Q	V	I	E	V	P	P	T	L	I	Y	M	Y	V	R	D	V	P	V	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.		T	T		B						B	S		S	S		S				B	S	S			T	T				B			T	T											S	S	S	S						S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
																																																						395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	E	Q	Y	R	G	I	G	I	R	I	E	D	D	I	V	I	T	E	T	G	N	E	N	L	T	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	Q	A	R	F	L	L	A	K	I	K	R	E	Y	G	T	L	P	F	A	Y	R	W	L	Q	N	D	M	P	E	G	Q	L	K	L	A	L	K	T	L	E	K	A	G	A	I	Y	G	Y	P	V	L	K	E	I	R	N	G	I	V	A	Q	F	E	H	T	I	I	V	E	K	D	S	V	I	V	T	T	E
Template Known Secondary structure		S														T	T	T	S				S	G	G	G	T	T	S	S															T	T	S										T	T								B							S	S					S
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions