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Job DescriptionP15034
Confidence100.00%DateThu Jan 5 11:34:21 GMT 2012
Rank1Aligned Residues438
% Identity99%Templatec1w7vD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:xaa-pro aminopeptidase; PDBTitle: znmg substituted aminopeptidase p from e. coli
Resolution2.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SEISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRV
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Template Sequence  SEISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRV
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S
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  RDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQLLNGLDVVYHAQGEYAYADVIVNSALEKLRKGSRQNLTAPA
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Template Conservation                                                                          
       
Template Sequence  RDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQLLNGLDVVYHAQGEYAYADVIVNSALEKLRKGSRQNLTAPA
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T
SGGGTT
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TTS
T
GGGT



S
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  TMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGARYPSYNTIVGSGENGC
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Template Sequence  TMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGARYPSYNTIVGSGENGC
Template Known Secondary structure 

S



TTS
TT

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GGGGG
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
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Query Sequence  ILHYTENECEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRI
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Template Sequence  ILHY. TENEEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRI
Template Known Secondary structure  STT
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TT

TT

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STT

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   241... .....250.........260.........270.........280.........290.........300.........310.........
 
   322.......330.........340.........350.........360.........370.........380.........390.........400.
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Query Sequence  MVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAPDAEVPEQYRG
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Template Sequence  MVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAPDAEVPEQYRG
Template Known Secondary structure  TSS
S
TTTTTTT

S
S

B
SSSSS

S


GGG




TT



TT
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   321........330.........340.........350.........360.........370.........380.........390.........400
 
   402.......410.........420.........430.........440
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Query Sequence  IGIRIEDDIVITETGNENLTASVVKKPEEIEALMVAARK
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Template Sequence  IGIRIEDDIVITETGNENLTASVVKKPEEIEALMVAARK
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B
SSSTTTTS

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   401........410.........420.........430.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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