Job Description P15034 Confidence 100.00% Date Thu Jan 5 11:34:21 GMT 2012 Rank 32 Aligned Residues 251 % Identity 19% Template c1b6aA_ PDB info PDB header:angiogenesis inhibitor Chain: A: PDB Molecule:methionine aminopeptidase; PDBTitle: human methionine aminopeptidase 2 complexed with tnp-470 Resolution 1.60 Å

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		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.						.	.
Predicted Secondary structure																																																																											.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.
Query Sequence		Q	N	L	T	A	P	A	T	M	I	D	W	R	P	V	V	H	E	M	R	L	F	K	S	P	E	E	I	A	V	L	R	R	A	G	E	I	T	A	M	A	H	T	R	A	M	E	K	C	R	P	G	M	F	E	Y	H	L	E	G	E	I	H	H	E	F	N	R	H	G	A	R	Y	.	.	.	.	.	P	S
Query Conservation																																																																											.	.	.	.	.
Alig confidence																	.																																																										.	.	.	.	.
Template Conservation																	.
Template Sequence		N	G	V	F	P	K	G	Q	E	C	E	Y	P	E	E	.	K	K	A	L	D	Q	A	S	E	E	I	W	N	D	F	R	E	A	A	E	A	H	R	Q	V	R	K	Y	V	M	S	W	I	K	P	G	M	T	M	I	E	I	C	E	K	L	E	D	C	S	R	K	L	I	K	E	N	G	L	N	A	G	L	A
Template Known Secondary structure		T	S														.								T																											T	T	S	B																	T		B	T	T	T
Template Predicted Secondary structure																	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.				.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		Y	N	T	I	V	G	S	G	E	N	G	C	I	L	H	Y	T	E	N	.	.	.	E	C	E	M	R	D	G	D	L	V	L	I	D	A	G	C	E	Y	K	G	Y	A	G	D	I	T	R	T	F	P	V	N	G	K	F	T	Q	A	Q	R	E	I	Y	D	I	V	L	E	S	L	E	T	S	L	R	L	Y	R
Query Conservation																					.	.	.
Alig confidence				.	.																.	.	.																																.						.	.	.
Template Conservation				.	.																																																		.						.	.	.
Template Sequence		F	P	.	.	T	G	C	S	L	N	N	C	A	A	H	Y	T	P	N	A	G	D	T	T	V	L	Q	Y	D	D	I	C	K	I	D	F	G	T	H	I	S	G	R	I	I	D	C	A	F	T	V	T	F	.	N	P	K	Y	D	.	.	.	T	L	L	K	A	V	K	D	A	T	N	T	G	I	K	C	A	G
Template Known Secondary structure				.	.						T	T									T	T				B			T	T												T	T											S	.	S	G	G	G		.	.	.
Template Predicted Secondary structure				.	.																																																		.						.	.	.
Template SS confidence
		219	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.				.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.		.	360	.	.	.	.				.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																																	.						.							.	.	.
Query SS confidence																																																	.						.							.	.	.
Query Sequence		P	G	T	S	I	L	E	V	T	G	E	V	V	R	I	M	V	S	G	L	V	K	L	G	I	L	K	G	D	V	D	E	L	I	A	Q	N	A	H	R	P	F	F	M	H	G	L	.	S	H	W	L	G	.	L	D	V	H	D	V	.	.	.	G	V	Y	G	Q	D	R	S	R	I	L	E	P	G	M	V	L
Query Conservation																																																	.						.							.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.												.						.							.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	V	R	L	C	D	V	G	E	A	I	Q	E	V	M	E	S	Y	E	V	E	I	D	G	.	.	.	.	.	.	.	.	.	.	.	K	T	Y	Q	V	K	P	I	R	N	L	N	G	H	S	I	G	Q	Y	R	I	H	A	G	K	T	V	P	I	V	K	G	G	E	A	T	R	M	E	E	G	E	V	Y
Template Known Secondary structure		T	T		B														T						T	T	.	.	.	.	.	.	.	.	.	.	.									T	T							B	T	T	B	S			S					S	S	S	S					B			T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.												.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	E	P	G	L	Y	I	A	P	D	A	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	E	T	F	G	S	T	G	K	G	V	V	H	D	D	M	E	C	S	H	Y	M	K	N	F	D	V	G	H	V	P	I	R	L	P	R	T	K	H	L	L	N	V	I	N	E	N	F	G	T	L	A	F	C	R	R	W	L	D	R	L	G	E	S	K	Y	L	M	A	L	K	N	L	C	D	L	G	I	V
Template Known Secondary structure									S	S		S						S									T	T								S														T	T	T	S										T	T			S											T	T	S
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
								396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	P	E	Q	Y	R	G	I	G	I	R	I	E	D	D	I	V	I	T	E	T	G	N	E	N	L	T	A	S
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		D	P	Y	P	P	L	C	D	I	K	G	S	Y	T	A	Q	F	E	H	T	I	L	L	R	P	T	C	K	E	V	V	S	R	G
Template Known Secondary structure										S	T	T														S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions