Return to main results Retrieve Phyre Job Id

Job DescriptionP39212
Confidence53.68%DateThu Jan 5 11:58:31 GMT 2012
Rank492Aligned Residues36
% Identity22%Templatec3kkcB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:tetr family transcriptional regulator; PDBTitle: the crystal structure of tetr transcriptional regulator from2 streptococcus agalactiae 2603v
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30... ......40.........50....
Predicted Secondary structure 

....





Query SS confidence 














. . . .




















Query Sequence  SAEFKRESAQLVVDQ. . . . KYTVADAAKAMDVGLSTMTRW
Query Conservation 
 


  

    
 ....
 
   

   


  

  
Alig confidence 














....




















Template Conservation 

  
  

  
    
    

  

  



  
 
  
Template Sequence  TKVAIYNAFISLLQENDYSKITVQDVIGLANVGRSTFYSH
Template Known Secondary structure  TSS
GGG

T

Template Predicted Secondary structure 








Template SS confidence 







































   10.........20.........30.........40.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions