Job Description P39212 Confidence 96.69% Date Thu Jan 5 11:58:31 GMT 2012 Rank 18 Aligned Residues 76 % Identity 11% Template c1iufA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:centromere abp1 protein; PDBTitle: low resolution solution structure of the two dna-binding2 domains in schizosaccharomyces pombe abp1 protein Resolution UNK

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.							.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																										.	.											.	.	.	.	.	.													.
Query SS confidence																										.	.											.	.	.	.	.	.													.
Query Sequence		A	P	M	K	K	R	N	F	S	A	E	F	K	R	E	S	A	Q	L	V	V	D	Q	K	.	.	Y	T	V	A	D	A	A	K	A	M	.	.	.	.	.	.	D	V	G	L	S	T	M	T	R	W	V	K	.	Q	L	R	D	E	R	Q	G	K	T	P	K	A	S	P	I	T	P	E	Q	I	E	I	R	K
Query Conservation																										.	.											.	.	.	.	.	.													.
Alig confidence																										.	.											.	.	.	.	.	.													.
Template Conservation
Template Sequence		G	K	I	K	R	R	A	I	T	E	H	E	K	R	A	L	R	H	Y	F	F	Q	L	Q	N	R	S	G	Q	Q	D	L	I	E	W	F	R	E	K	F	G	K	D	I	S	Q	P	S	V	S	Q	I	L	S	S	K	Y	S	Y	L	D	N	T	V	E	K	P	W	D	V	K	R	N	R	P	P	K	Y	P	L
Template Known Secondary structure					S	S	S				S												S	S	S	S																S	S			S	S	S	S	T	T										T	T	T	S		S	S	S	S	S	S	S						S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		82	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	K	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	A	A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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