Job Description P52124 Confidence 71.34% Date Thu Jan 5 12:05:27 GMT 2012 Rank 412 Aligned Residues 57 % Identity 7% Template d2d1ha1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like Resolution 2.05

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	C	W	I	K	D	Y	C	T	Q	K	F	S	S	C	I	K	K	N	I	I	L	Q	F	G	P	N	K	F	R	N	R	D	K	A	N	E	L	I	R	I	L	I	S	Q	N	K	I	F	I	S	S	W	G	K	T	K	I	I	N	I	T
Query Conservation
Alig confidence															.	.													.	.	.
Template Conservation															.	.													.	.	.
Template Sequence		V	A	V	L	L	K	X	V	E	I	E	K	P	.	.	I	T	S	E	E	L	A	D	I	F	K	L	.	.	.	S	K	T	T	V	E	N	S	L	K	K	L	I	E	L	G	L	V	V	R	T	K	T	P	K	Y	Y	Y	S	I	S	S
Template Known Secondary structure													S		.	.											T		.	.	.															T	T	S															T
Template Predicted Secondary structure															.	.													.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions