Job Description P52124 Confidence 88.40% Date Thu Jan 5 12:05:27 GMT 2012 Rank 44 Aligned Residues 153 % Identity 13% Template c3eqxB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:fic domain containing transcriptional regulator; PDBTitle: crystal structure of a fic family protein (so_4266) from shewanella2 oneidensis at 1.6 a resolution Resolution 1.60 Å

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		284	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		H	Q	R	L	M	E	I	V	N	E	S	I	I	.	K	I	N	E	N	N	R	I	C	L	R	F	S	A	E	A	E	R	H	W	I	E	F	Y	N	Q	V	E	S	E	M	R	M	I	G	L	L	Y	D	F	K	D	Y	A	S	K	M	A	E	N	M	A	R	L	A	A	L	L	H	Y	F	S	G	D	G	G
Query Conservation															.
Alig confidence															.																												.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	G	R	T	G	R	V	L	N	I	L	Y	L	I	D	Q	Q	L	L	S	A	P	I	L	Y	L	S	R	Y	I	V	A	H	K	Q	D	Y	Y	R	L	L	.	L	N	V	T	T	Q	Q	E	W	Q	P	W	I	I	F	I	L	N	A	V	E	Q	T	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																	T	T	S		S	S	S				T							T									.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	S	V	T	A	V	K	A	A	V	E	I	V	A	W	Y	I	E	E	Y	I	R	L	F	S	K	K	E	E	F	S	L	D	V	S	E	A	D	E	L	Y	C	W	I	K	D	Y	C	T	Q	K	F	S	S	C	I	K	K	N	I	I	L	Q	F	G	P	N	K	F	R	N	R	D	K	A	N	E	L	I
Query Conservation
Alig confidence		.	.	.	.																											.	.	.	.	.														.	.	.	.	.	.															.	.	.
Template Conservation		.	.	.	.																											.	.	.	.	.														.	.	.	.	.	.															.	.	.
Template Sequence		.	.	.	.	W	T	T	H	K	I	A	A	A	R	E	L	I	A	H	T	T	E	Y	V	R	Q	Q	L	P	K	.	.	.	.	.	I	Y	S	H	E	L	V	Q	V	I	F	E	Q	.	.	.	.	.	.	P	Y	C	R	I	Q	N	L	V	E	S	G	L	A	.	.	.	K	R	Q	T	A	S	V	Y	L
Template Known Secondary structure		.	.	.	.																									T	T	.	.	.	.	.	T													.	.	.	.	.	.	S										T	T	S		.	.	.
Template Predicted Secondary structure		.	.	.	.																											.	.	.	.	.														.	.	.	.	.	.															.	.	.
Template SS confidence
						270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.						.	.	.	.	300	.	.	.	.	.	.	.	.							.	310	.	.	.	.	.	.	.	.	.	320	.	.				.	.	.	.	.	.	.	330	.
		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	L	I	S	Q	N	K	I	F	I	S	S	W	G	K	T	K	I	I	N	I	T	H	C	V	F
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		K	Q	L	C	D	I	G	V	L	E	E	V	Q	S	G	K	E	K	L	.	F	V	H	P	K	F	V
Template Known Secondary structure							T	T	S							T	T				.
Template Predicted Secondary structure																					.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350		.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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