Job Description P52124 Confidence 89.69% Date Thu Jan 5 12:05:27 GMT 2012 Rank 32 Aligned Residues 85 % Identity 8% Template c3e6mD_ PDB info PDB header:transcription regulator Chain: D: PDB Molecule:marr family transcriptional regulator; PDBTitle: the crystal structure of a marr family transcriptional2 regulator from silicibacter pomeroyi dss. Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		W	Y	I	E	E	Y	I	R	L	F	S	K	K	E	E	F	S	L	D	V	S	E	A	D	E	L	Y	C	W	I	K	D	Y	C	T	Q	K	F	S	S	C	I	K	K	N	I	I	L	Q	F	G	P	N	K	F	R	N	R	D	K	A	N	E	L	I	R	I	L	I	S	Q	N	K	I	F	I	S	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																									.	.													.	.	.																						.	.	.
Template Conservation																																									.	.													.	.	.
Template Sequence		Y	L	L	T	R	I	T	H	I	W	S	S	E	L	N	Q	A	L	A	S	E	K	L	P	T	P	K	L	R	L	L	S	S	L	S	A	Y	G	E	.	.	L	T	V	G	Q	L	A	T	L	G	V	X	.	.	.	E	Q	S	T	T	S	R	T	V	D	Q	L	V	D	E	G	L	A	A	R	S	I	S	D
Template Known Secondary structure																			T	G	G	G	T																S		.	.										T	T	S	.	.	.															T	T	S							S
Template Predicted Secondary structure																																									.	.													.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.				.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		455	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	W	G	K	T	K	I	I	N	I	T	H	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	Q	R	K	R	T	V	V	L	T	R	K
Template Known Secondary structure		S	S	S
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions