Job Description P52124 Confidence 94.50% Date Thu Jan 5 12:05:27 GMT 2012 Rank 12 Aligned Residues 299 % Identity 12% Template c2qbyA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:cell division control protein 6 homolog 1; PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus) Resolution 3.35 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	T	L	A	E	S	G	E	R	K	S	T	V	D	K	L	L	M	K	P	L	Y	Q	L	E	E	D	L	F	E	K	Y	T	H	D	L	T	A	W	R	N	D	E	A	I	F	N	I	E	K	K	A	L	M	S	K	L	K	S	D	I	R	R	N	K	D	H	L	A	T	N	E	R	L	K	E	L	L	T
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	F	I	Y	G	L	T	G	T	G	K	T	A	V	V	K	F	V	L	S	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	K	K	F	L	G	K	F	K	H	V	Y	I	N	T	R	Q	I	D	T	P	Y	R	V	L	A	D	L	L
Template Known Secondary structure								T	T	S	S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T		S	S													S									T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80																														.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	P	K	A	P	V	R	F	K	F	L	F	N	D	A	T	P	A	A	I	K	A	H	L	C	G	H	W	R	S	V	G	I	M	S	D	E	A	G	I	I	F	N	G	Y	T	L	N	E	L	P	F	I	N	K	M	W	D	G	S	I	F	T	V	E	R	K	N	E	P	E	K	L	I	R	D	A	R	I
Query Conservation
Alig confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	S	L	D	V	K	V	P	F	T	G	L	S	I	A	E	L	Y	R	R	L	V	K	A	V	R	D	Y	G	S	Q	V	V	I	V	L	D	E	I	D	A	F	V	K	K	Y	N	D	D	I	L	Y	K	L	S	R	I	N	S	E	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	S
Template Known Secondary structure		T	T	T	S					S	S	S																T			S								T							S	S		S	T											S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.																.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	S	L	M	V	Q	P	N	V	F	K	G	Y	I	D	R	K	G	D	M	A	K	G	I	G	F	F	A	R	C	L	M	C	Q	P	A	S	T	Q	G	N	R	K	I	S	N	P	I	F	S	N	E	H	L	P	V	F	H	Q	R	L	M	E	I	V	N	E	S	I	I	K	I	N	E	N	N	R	I	C
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	I	G	I	T	N	D	V	K	F	V	D	L	L	.	.	.	.	.	.	.	.	.	D	P	R	V	K	S	S	L	S	E	E	E	.	.	.	.	.	.	.	.	I	I	F	P	P	Y	N	A	E	E	L	E	D	I	L	T	K	R	A	Q	M	A	.	.	.	.	.	.	.	.	.	.	.	.	F	K	P
Template Known Secondary structure							S		G	G	G	G	G	G		.	.	.	.	.	.	.	.	.	T	T					T	T	T	T			.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	B		S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190										.	.	.	.	.	.	.	.	.	200	.	.									.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.													.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	F	S	A	E	A	E	R	H	W	I	E	F	Y	N	Q	V	E	S	E	M	R	M	I	G	L	L	Y	D	F	K	D	Y	A	S	K	M	A	E	N	M	A	R	L	A	A	L	L	H	Y	F	S	G	D	G	G	D	I	S	V	T	A	V	K	A	A	V	E	I	V	A	W	Y	I	E	E	Y	I	R
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.															.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.															.	.
Template Sequence		G	V	L	P	D	N	V	I	K	L	C	A	A	L	A	A	R	E	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	R	R	A	L	D	L	L	R	V	S	G	E	I	A	E	R	M	K	.	D	T	K	V	K	E	E	Y	V	Y	M	A	K	E	.	.	E	I	E	R	D	R	V	R	D
Template Known Secondary structure		S		S															T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.																			T	T	.		S	S												.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.															.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.															.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.	290
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		L	F	S	K	K	E	E	F	S	L	D	V	S	E	A	D	E	L	Y	C	W	I	K	D	Y	C	T	Q	K	F	S	S	C	I	K	K	.	N	I	I	L	Q	F	G	P	N	K	F	R	N	R	D	K	A	N	E	L	I	R	I	L	I	S	Q	N	K	I	F	I	S	S	W	G	K	T	K
Query Conservation																																						.
Alig confidence									.	.	.	.	.	.																								.
Template Conservation									.	.	.	.	.	.
Template Sequence		I	I	L	T	L	P	F	.	.	.	.	.	.	H	S	K	L	V	L	M	A	V	V	S	I	S	V	S	T	T	G	A	V	Y	E	T	Y	L	N	I	C	K	K	L	G	V	E	A	V	T	Q	R	R	V	S	D	I	I	N	E	L	D	M	V	G	I	L	T	A	K	V	V	N	R	G	R
Template Known Secondary structure					T	S			.	.	.	.	.	.																																T																				T	S									T	T
Template Predicted Secondary structure									.	.	.	.	.	.
Template SS confidence
		291	.	.	.	.	.	.							.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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