Job Description P77619 Confidence 100.00% Date Thu Jan 5 12:31:10 GMT 2012 Rank 11 Aligned Residues 332 % Identity 19% Template d1yqsa1 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.05

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	Q	M	D	R	W	I	S	Q	Q	V	D	V	G	Y	P	S	V	N	L	L	I	I	K	D	N	Q	I	V	Y	R	K	A	W	G	A	A	K	K	Y	D	G	S	V	L	M	E	Q	P	V	K	A	T	T	G	T	L	Y	D	L	A	S	N	T	K	M	Y	A	T	N	F	A	L	Q	K	L	M	S	E
Query Conservation
Alig confidence																															.										.	.	.	.	.	.	.																							.
Template Conservation																															.										.	.	.	.	.	.	.																							.
Template Sequence		D	T	G	L	Q	A	V	L	H	T	A	L	S	Q	G	A	P	G	A	M	V	R	V	D	D	N	G	T	I	.	H	Q	L	S	E	G	V	A	D	.	.	.	.	.	.	.	R	A	T	G	R	A	I	T	T	T	D	R	F	R	V	G	S	V	T	K	S	F	.	S	A	V	V	L	L	Q	L	V	D	E
Template Known Secondary structure															T	T		S									T	T			.							B	S		.	.	.	.	.	.	.	T	T	T			B			T	T		B				G	G	G					.											T
Template Predicted Secondary structure																															.										.	.	.	.	.	.	.																							.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.								.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.						.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.
Query Sequence		G	K	L	H	P	D	D	R	I	A	K	Y	I	P	G	F	A	D	S	P	N	D	T	I	K	G	K	N	T	L	R	I	S	D	L	L	H	H	S	G	G	F	P	A	D	P	Q	Y	P	N	K	A	V	A	.	.	.	.	.	G	A	L	Y	S	Q	D	K	G	Q	T	L	E	M	I	K	R	T	P	L	E
Query Conservation																																																								.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.																															.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.
Template Sequence		G	K	L	D	L	D	A	S	V	N	T	Y	L	P	G	L	.	.	.	.	.	.	.	.	L	P	D	D	R	I	T	V	R	Q	V	M	S	H	R	S	G	L	Y	D	Y	T	N	D	M	F	A	Q	T	V	P	G	F	E	S	V	R	N	K	V	F	S	Y	Q	D	L	I	T	L	S	L	K	H	G	V	T
Template Known Secondary structure		T	S			T	T	S	B					S	T	T		.	.	.	.	.	.	.	.	S	S		T	T		B						T	T		S					T					T	S	S									T	T														T	S			S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.									.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	P	G	S	K	H	I	Y	S	D	V	D	Y	M	L	L	G	F	I	V	E	S	V	T	G	Q	P	L	D	R	Y	V	E	E	S	I	Y	R	P	L	G	L	T	H	T	V	F	N	P	L	L	K	G	F	K	P	Q	Q	I	A	A	T	E	L	N	G	N	T	R	D	G	V	I	H	F	P	N	I	R
Query Conservation
Alig confidence																																																																																.	.
Template Conservation																																																																																.	.
Template Sequence		N	A	P	G	A	A	Y	S	Y	S	N	T	N	F	V	V	A	G	M	L	I	E	K	L	T	G	H	S	V	A	T	E	Y	Q	N	R	I	F	T	P	L	N	L	T	D	T	F	Y	V	H	P	D	T	V	I	P	G	T	H	A	N	G	Y	L	T	P	D	E	A	G	G	A	L	V	D	S	T	E	.	.
Template Known Secondary structure		S	S	T	T	S																					S	S										T	T	T	T	T	T		T	T		B			T	T						S	S	B								S	S	T	T									.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.			.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		T	S	T	L	W	G	Q	V	H	D	E	K	A	F	Y	S	M	G	G	V	S	G	H	A	G	L	F	S	N	T	G	D	I	A	V	L	M	Q	T	M	L	N	G	G	G	Y	G	D	V	Q	L	F	N	A	E	T	V	K	M	F	T	T	S	S	.	.	K	E	D	A	T	F	G	L	G	W	R	V	N	G
Query Conservation																																																																		.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.																.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	V	S	W	A	Q	S	A	G	A	V	I	S	S	T	Q	D	L	D	T	F	F	S	A	L	M	S	G	.	.	.	.	.	.	Q	L	M	S	A	A	Q	L	A	Q	M	Q	Q	W	T	T	V	N	S	T	Q	G	Y	G	L	G	L	R	R	R	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T	G	G	G	T																		T	T	.	.	.	.	.	.		S	S									T							T	T					S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template SS confidence
																229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.							.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	T	M	T	P	T	F	G	T	L	A	S	P	Q	T	Y	G	H	T	G	W	T	G	T	V	T	V	I	D	P	V	N	H	M	T	I	V	M	L	S	N	K	P	H	S	P	V	A	D	P	Q	K	N	P	N	M	F	E	S	G	Q	L	P	I	A	T	Y	G	W	V	V	D	Q	V	Y	A	A	L	K
Query Conservation
Alig confidence													.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	C	G	I	S	V	Y	G	H	T	.	.	.	.	.	.	G	T	V	Q	G	Y	Y	T	Y	A	F	A	S	K	D	G	K	R	S	V	T	A	L	A	N	T	S	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	V	L	N	T	M	A	R	T	L	E	S	A	F	C
Template Known Secondary structure			T	T	S								.	.	.	.	.	.				T	T									T	T	S	S								S			S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T
Template Predicted Secondary structure													.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.							300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.																			.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		433	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		345	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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