Job Description P77619 Confidence 100.00% Date Thu Jan 5 12:31:10 GMT 2012 Rank 2 Aligned Residues 366 % Identity 22% Template d1ci9a_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.80

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		N	V	E	R	L	N	Q	M	D	R	W	I	S	Q	Q	V	D	V	G	.	Y	P	S	V	N	L	L	I	I	K	D	N	Q	I	V	Y	R	K	A	W	G	A	A	K	K	Y	D	G	S	V	L	M	E	Q	P	V	K	A	T	T	G	T	L	Y	D	L	A	S	N	T	K	M	Y	A	T	N	F	A	L	Q
Query Conservation																					.
Alig confidence																					.																									.	.	.	.	.	.	.																							.
Template Conservation																																														.	.	.	.	.	.	.																							.
Template Sequence		A	A	S	L	A	A	R	L	D	A	V	F	D	Q	A	L	R	E	R	R	L	V	G	A	V	A	I	V	A	R	H	G	E	I	L	Y	R	R	A	Q	G	L	A	D	.	.	.	.	.	.	.	R	E	A	G	R	P	M	R	E	D	T	L	F	R	L	A	S	V	T	K	P	I	.	V	A	L	A	V	L
Template Known Secondary structure																			T	T	S		S									T	T													.	.	.	.	.	.	.	T	T	T	T					T	T		B				G	G	G					.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.																							.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.								.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.									.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.
Query Sequence		K	L	M	S	E	G	K	L	H	P	D	D	R	I	A	K	Y	I	P	G	F	A	D	S	P	N	D	T	I	K	G	K	N	T	L	R	I	S	D	L	L	H	H	S	G	G	F	P	A	D	P	Q	Y	.	.	.	.	.	.	.	.	P	N	K	A	V	A	G	A	L	Y	S	Q	D	K	G	Q	T	L	E
Query Conservation																																																							.	.	.	.	.	.	.	.
Alig confidence																							.	.																															.	.	.	.	.	.	.	.
Template Conservation																							.	.
Template Sequence		R	L	V	A	R	G	E	L	A	L	D	A	P	V	T	R	W	L	P	E	F	.	.	R	P	R	L	A	D	G	S	E	P	L	V	T	I	H	H	L	L	T	H	T	S	G	L	G	Y	W	L	L	E	G	A	G	S	V	Y	D	R	L	G	I	S	D	G	I	D	L	R	D	F	D	L	D	E	N	L	R
Template Known Secondary structure							T	S	S		T	T	S	B	G	G	G	T		T	T		.	.			B		T	T	S						B							T		S	S									T	T	S						T				S	S	S			S	S
Template Predicted Secondary structure																							.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	K	R	T	P	L	E	Y	Q	P	G	S	K	H	I	Y	S	D	V	D	Y	M	L	L	G	F	I	V	E	S	V	T	G	Q	P	L	D	R	Y	V	E	E	S	I	Y	R	P	L	G	L	T	H	T	V	F	N	P	L	L	K	G	F	K	P	Q	Q	I	A	A	T	E	L	N	G	N	T	R	D	G
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		R	L	A	S	A	P	L	S	F	A	P	G	S	G	W	Q	Y	S	L	.	A	L	D	V	L	G	A	V	V	E	R	A	T	G	Q	P	L	A	A	A	V	D	A	L	V	A	Q	P	L	G	M	R	D	C	G	F	V	S	A	E	P	E	R	F	A	V	P	Y	H	D	G	Q	P	E	P	V	R	M	R	D
Template Known Secondary structure						S	B		S	S		T	T	S						T	.														T	S										T					T			S		B	S			S		G	G	G	B								S	S	S						T
Template Predicted Secondary structure																					.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		V	I	H	F	P	N	I	R	T	S	T	L	W	G	Q	V	H	D	E	K	A	F	Y	S	M	G	G	V	S	G	H	A	G	L	F	S	N	T	G	D	I	A	V	L	M	Q	T	M	L	N	G	G	G	Y	G	D	V	Q	L	F	N	A	E	T	V	K	M	F	T	T	S	.	S	K	E	D	A	T	F	G
Query Conservation																																																																									.
Alig confidence																																																																									.
Template Conservation
Template Sequence		G	I	E	V	P	L	P	E	G	H	G	A	A	V	R	F	A	P	S	R	V	F	E	P	G	A	Y	P	S	G	G	A	G	M	Y	G	S	A	D	D	V	L	R	A	L	E	A	I	R	A	N	P	G	F	L	P	E	T	L	A	D	A	A	R	R	D	Q	A	G	V	G	A	E	T	R	G	P	G	W	G
Template Known Secondary structure		T							T	T	S		S						G	G	G	G	G		T	T	S				T	T	T																				S	S	S	S										S		S	S		G	G	G		T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	W	R	V	N	G	N	A	T	M	T	P	T	F	G	T	L	A	S	P	Q	T	Y	G	H	T	G	W	T	G	T	V	T	V	I	D	P	V	N	H	M	T	I	V	M	L	S	N	K	P	H	S	P	V	A	D	P	Q	K	N	P	N	M	F	E	S	G	Q	L	P	I	A	T	Y	G	W	V	V	D
Query Conservation
Alig confidence													.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	G	Y	L	S	A	V	L	D	D	P	.	A	A	A	G	T	P	Q	H	A	G	T	L	Q	W	G	G	V	Y	G	H	S	W	F	V	D	R	A	L	G	L	S	V	L	L	L	T	N	T	A	Y	E	G	M	S	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	I	A	L	R	D
Template Known Secondary structure				S	S	S				S			.				T		S	S		T	T							T	T	T							G	G	G	T								S			T					S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380																.	.	.	.	.	.	.
		426	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	Y
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		388	.	390

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions