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Job DescriptionP77619
Confidence98.52%DateThu Jan 5 12:31:10 GMT 2012
Rank56Aligned Residues170
% Identity19%Templated1alqa_
SCOP infobeta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.... .....70.........80.........90.........100.........110.........120....
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Query Sequence  ISQQVDVGYPSVNLLIIK. . DNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLASNTKMYATNFALQKLMSEGKLHP
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Template Sequence  LNDLEKKYNAHIGVYALDTKSGKEV. . . . . . . . . . . . . . . . . . . . . KFNSDKRFAYASTSKAI. NSAILLEQVPYNKLNK
Template Known Secondary structure  T
TTT

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GGG.SS
GGGTT
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   33......40.........50....... ..60.........70.... .....80.........90
 
   125....130.........140.........150.........160.........170.........180.........190.........200....
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Query Sequence  DDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGGFPADPQYPNKAVAGALYSQDKGQTLEMIKRTPLEYQPGSKHIYS
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Template Sequence  KVHINKDDIV. AYSPILEKYVGKDITLKALIE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ASMTYS
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   94.....100... ......110.........120.... .....130
 
   205....210.........220 .........230.........240.........250.........260.........270.........280...
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Query Sequence  DVDYMLLGFIVESVTG. QPLDRYVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTLWGQVH
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Template Sequence  . . DNTANNKIIKEIGGIKKVKQRLKE. . . . . LGDKVTNPVRYEIELNYYSP. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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T
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TTGGG


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   131........140.........150.... .....160.........170....
 
   284.....290.........300.........310.........320.........330.....
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Query Sequence  DEKAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGDVQLFNAETVKMFT
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Template Sequence  . . . . . . . . . . . . KSKKDTSTPAAFGKTLNKLIAN. . . . . . GKLSKENKKFLL
Template Known Secondary structure  ............T

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   175....180.........190...... ...200........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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