Job Description P77619 Confidence 100.00% Date Thu Jan 5 12:31:10 GMT 2012 Rank 12 Aligned Residues 306 % Identity 19% Template c3tg9A_ PDB info PDB header:penicillin binding protein Chain: A: PDB Molecule:penicillin-binding protein; PDBTitle: the crystal structure of penicillin binding protein from bacillus2 halodurans Resolution 2.20 Å

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		43	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		M	D	R	W	I	S	Q	Q	V	D	.	V	G	Y	P	S	V	N	L	L	I	I	K	D	N	Q	I	V	Y	R	K	A	W	G	A	A	K	K	Y	D	G	S	V	L	M	E	Q	P	V	K	A	T	T	G	T	L	Y	D	L	A	S	N	T	K	M	Y	A	T	N	F	A	L	Q	K	L	M	S	E	G	K
Query Conservation												.
Alig confidence												.									.																		.	.	.	.	.	.	.																							.
Template Conservation																					.																		.	.	.	.	.	.	.																							.
Template Sequence		M	K	N	H	L	H	T	I	M	E	D	W	K	L	S	G	T	A	L	.	M	K	K	G	E	D	I	P	F	I	A	S	L	G	F	A	N	.	.	.	.	.	.	.	R	A	E	R	I	P	N	E	H	H	T	R	F	G	I	A	S	G	C	K	L	F	.	T	A	I	A	I	C	Q	L	V	E	A	G	K
Template Known Secondary structure														T							.				T	T	S								S				.	.	.	.	.	.	.	T	T	T	T					T	T		B				G	G	G	G				.												T	S
Template Predicted Secondary structure																					.																		.	.	.	.	.	.	.																							.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.								.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	P	D	D	R	I	A	K	Y	I	P	G	F	A	D	S	P	N	D	T	I	K	G	K	N	T	L	R	I	S	D	L	L	H	H	S	G	G	F	P	A	D	P	Q	Y	P	N	K	A	V	A	G	A	L	Y	S	Q	D	K	G	Q	T	L	E	M	I	K	R	T	P	L	E	Y	Q	P	G	S	K	H
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	F	D	T	P	L	S	D	W	L	D	A	.	.	.	.	.	.	.	.	.	.	P	F	P	N	V	T	I	H	H	L	L	T	H	T	S	G	V	P	D	Y	F	D	E	D	L	W	K	D	V	P	M	Y	H	L	R	R	L	K	D	F	L	P	L	F	Q	H	A	P	M	K	F	P	P	G	H	R	F
Template Known Secondary structure				T	T		B	G	G	G	T		S	S	.	.	.	.	.	.	.	.	.	.			T	T		B						T	T		S					S					G	G	G	T	S		G	G	G			S	G	G	G	G	G	G	G	T	T	T	S				S		T	T	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.											.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	S	D	V	D	Y	M	L	L	G	F	I	V	E	S	V	T	G	Q	P	L	D	R	Y	V	E	E	S	I	Y	R	P	L	G	L	T	H	T	V	F	N	P	L	L	K	G	F	K	P	Q	Q	I	A	A	T	E	L	N	G	N	T	R	D	G	V	I	H	F	P	N	I	R	T	S	T	L	W	G	Q
Query Conservation
Alig confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	Y	N	N	A	G	F	I	L	L	G	L	V	V	E	S	V	S	G	V	T	F	Q	E	Y	V	E	A	N	V	F	Q	R	A	G	M	H	E	S	G	Y	F	A	F	D	T	L	P	A	K	T	A	L	G	Y	I	D	L	E	D	G	S	W	K	T	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																				S	S										T					T		T	T		B			B	G	G	G			S	S	B								T	T	S					S	T	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.				340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		V	H	D	E	K	A	F	Y	S	M	G	G	V	S	G	H	A	G	L	F	S	N	T	G	D	I	A	V	L	M	Q	T	M	L	N	G	G	G	Y	G	D	V	Q	L	F	N	A	E	T	V	K	M	F	T	T	S	S	K	.	.	.	E	D	A	T	F	G	L	G	W	R	V	N	G	N	A	T	M	T	P
Query Conservation																																																												.	.	.
Alig confidence		.	.	.	.	.	.																															.	.	.	.	.	.																	.	.	.
Template Conservation		.	.	.	.	.	.																															.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	Y	S	L	P	V	I	G	G	S	D	G	G	A	Y	V	T	A	E	D	M	M	K	L	W	L	A	L	M	R	H	.	.	.	.	.	.	E	L	L	N	E	T	Y	T	Q	K	L	L	T	P	H	V	H	C	E	D	D	D	Y	Y	G	Y	G	V	W	I	K	Q	Q	D	G	A	I	S
Template Known Secondary structure		.	.	.	.	.	.	T	T	S		S	B			S	S	S																		T	T	.	.	.	.	.	.	S	S	S									T	S							T	T					S	S	S						T	T
Template Predicted Secondary structure		.	.	.	.	.	.																															.	.	.	.	.	.
Template SS confidence
								216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.							.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	G	T	L	A	S	P	Q	T	Y	G	H	T	G	W	T	G	T	V	T	V	I	D	P	V	N	H	M	T	I	V	M	L	S	N	K	P	H	S
Query Conservation
Alig confidence							.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.
Template Sequence		K	Y	H	V	M	.	.	.	.	.	.	G	Y	D	P	G	V	C	F	H	S	A	F	Y	P	T	S	N	G	I	V	V	V	C	A	N	Q	S	S	G
Template Known Secondary structure							.	.	.	.	.	.				T	T									T	T	T	T								S	B	S	S
Template Predicted Secondary structure							.	.	.	.	.	.
Template SS confidence
		284	.	.	.	.							.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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