Job Description P77619 Confidence 98.98% Date Thu Jan 5 12:31:10 GMT 2012 Rank 48 Aligned Residues 254 % Identity 18% Template c3qhyA_ PDB info PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:beta-lactamase; PDBTitle: structural, thermodynamic and kinetic analysis of the picomolar2 binding affinity interaction of the beta-lactamase inhibitor protein-3 ii (blip-ii) with class a beta-lactamases Resolution 2.06 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	Q	M	D	R	W	I	S	Q	Q	V	D	V	G	Y	P	S	V	N	L	L	I	I	K	D	N	Q	I	V	Y	R	K	A	W	G	A	A	K	K	Y	D	G	S	V	L	M	E	Q	P	V	K	A	T	T	G	T	L	Y	D	L	A	S	N	T	K	M	Y	A	T	N	F	A	L	Q	K	L	M	S	E
Query Conservation
Alig confidence													.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation													.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		H	K	E	F	S	Q	L	E	K	K	F	.	.	D	A	R	L	G	V	Y	A	I	D	T	G	T	N	Q	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Y	R	P	N	E	R	F	A	F	A	S	T	Y	K	A	L	.	A	A	G	V	L	L	Q	Q	N	S	T
Template Known Secondary structure													.	.	T										T	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	T	T						G	G	G					.									S		G
Template Predicted Secondary structure													.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.																						.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	L	H	P	D	D	R	I	A	K	Y	I	P	G	F	A	D	S	P	N	D	T	I	K	G	K	N	T	L	R	I	S	D	L	L	H	H	S	G	G	F	P	A	D	P	Q	Y	P	N	K	A	V	A	G	A	L	Y	S	Q	D	K	G	Q	T	L	E	M	I	K	R	T	P	L	E	Y	Q	P	G	S
Query Conservation
Alig confidence																												.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	L	D	E	V	I	T	Y	T	K	E	D	L	V	D	Y	S	P	V	T	E	K	H	V	D	.	T	G	M	T	L	G	E	I	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A
Template Known Secondary structure		G	G	G	G	S						G	G	G			S	S		T	T	T	T	T	S	T	T	.	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.																																											.
		200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		K	H	I	Y	S	.	D	V	D	Y	M	L	L	G	F	I	V	E	S	V	T	G	Q	P	L	D	R	Y	V	E	E	S	I	Y	R	P	L	G	L	T	H	T	V	F	N	P	L	L	K	G	F	K	P	Q	Q	I	A	A	T	E	L	N	G	N	T	R	D	G	V	I	H	F	P	N	I	R	T	S	T	L
Query Conservation							.
Alig confidence							.												.	.	.	.	.	.										.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.										.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	R	Y	S	D	N	T	A	G	N	I	L	F	H	K	I	.	.	.	.	.	.	G	G	P	K	G	Y	E	K	A	.	L	R	Q	M	G	D	R	V	T	M	S	D	R	F	E	T	E	L	N	E	A	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																		T	.	.	.	.	.	.	T									.				T	T			S		B					T	T	G	G	G				T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.										.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.							.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	G	Q	V	H	D	E	K	A	F	Y	S	M	G	G	V	S	G	H	A	G	L	F	S	N	T	G	D	I	A	V	L	M	Q	T	M	L	N	G	G	G	Y	G	D	V	Q	L	F	N	A	E	T	V	K	M	F	T	T	S	S	K	E	D	A	T	F	G	L	G	W	R	V	N	G	N	A	T	M	T	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.																				.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.																				.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	I	R	D	T	S	T	A	K	A	I	A	T	N	L	K	A	F	T	A	G	.	.	.	.	.	.	N	A	L	P	N	H	K	R	N	I	L	T	K	W	M	K	G	N	A	.	.	.	.	.	T	G	D	K	L	I	R	A	G	V	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T			T	T																	S	.	.	.	.	.	.	S	S	S													B	S		G	.	.	.	.	.	G	G	T	T	T					S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.																				.	.	.	.	.
Template SS confidence
																			175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.							.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.						.	.	.	.	220	.	.	.	.	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.			.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		T	F	G	T	L	A	S	P	Q	T	Y	G	H	T	G	W	T	G	T	V	T	V	I	D	P	V	N	H	.	.	M	T	I	V	M	L	S	N	K	P	H	S	P	V	A	D	P	Q	K	N	P	N	M	F	E	S	G	Q	L	P	I	A	T	Y	G	W	V	V	D	Q	V	Y	A	A	L	K
Query Conservation																														.	.
Alig confidence																														.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	N	W	V	V	A	D	K	S	G	A	G	S	Y	G	T	R	N	D	I	A	I	V	W	P	P	N	R	A	P	I	I	I	A	I	L	S	S	K	D	E	K	G	A	T	Y	D	N	Q	L	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	A	E	V	I	V	N	A	F	R
Template Known Secondary structure		T	T	S										T	T	T											T	T	S												S	S	T	T										.	.	.	.	.	.	.	.	.	.	.	.	.										T
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.														.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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