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Job DescriptionP77619
Confidence99.12%DateThu Jan 5 12:31:10 GMT 2012
Rank40Aligned Residues251
% Identity18%Templatec3p09A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-lactamase; PDBTitle: crystal structure of beta-lactamase from francisella tularensis
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50.........60.........70.........80.........90.........100.........110.........120.
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Query Sequence  QMDRWISQQVDVGYPSVNLLIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLASNTKMYATNFALQKLMSEGK
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Template Sequence  QLDDSFKNLENKYDGKIGIYTLNTN. . . . . . . IKY. . . . . . . . . . . . . . . . NESYHFPICSVFKFL. LVGAILDYDXHNQ
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S


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GGG.ST
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   20.........30.........40.... ... ..50.........60.. .......70.....
 
   122.......130.........140.........150.........160.........170.........180.........190.........200.
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Query Sequence  LHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGGFPADPQYPNKAVAGALYSQDKGQTLEMIKRTPLEYQPGSKH
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Template Sequence  GFLDKKIP. . . . . . . . . . . . . . . . . . . INQDDIGKLGYAPI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TAKNVGKTL
Template Known Secondary structure  TGGG
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TT



TT..............................GGG
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   80....... ..90.........100. ........110
 
   202.......210. ........220.........230.........240.........250.........260.........270....
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Query Sequence  IYSDVDYMLL. . . . . . . GFIVESVTGQPLDRYVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIR
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Template Sequence  TISQLNYAAILSDSPASNILVRELGG. . . LQNLNKFIKK. LGDNDTIITADEPEINYTQP. . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT
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TTGGG


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   111........120.........130...... ...140...... ...150.........160......
 
   275....280.........290.........300.........310.........320.........330.........340.........350....
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Query Sequence  TSTLWGQVHDEKAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGDVQLFNAETVKMFTTSSKEDATFGLGWRVNGNA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . HSNINKTTPKAITKDIYKLAFG. . . . . . NILDKKHKDIFIKYLQDNNTGANRIAFSXPK
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TT
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TTTTTGGGGS
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   167..170.........180........ .190.........200.........210.........
 
   355....360.........370.........380.... .....390.........400.........410.........420.........430..
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Query Sequence  TMTPTFGTLASPQTYGHTGWTGTVTVIDPV. . NHMTIVMLSNKPHSPVADPQKNPNMFESGQLPIATYGWVVDQVYAALK
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Template Sequence  DWIIGDKT. . . . GTCGQYAATNDVAIIWPKNQQPIALGILYTNPNDKNAPSNEEII. . . . . . . . . . . . QQAAKLIANDLT
Template Known Secondary structure  TS....
SSTT

TTS


TT
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   220....... ..230.........240.........250.........260.........270. ........280...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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