Job Description P77619 Confidence 100.00% Date Thu Jan 5 12:31:10 GMT 2012 Rank 9 Aligned Residues 333 % Identity 22% Template c3ozhA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-lactamase/d-alanine carboxypeptidase; PDBTitle: crystal structure of beta-lactamase/d-alanine carboxypeptidase from2 yersinia pestis Resolution 1.91 Å

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		41	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		N	Q	M	D	R	W	I	S	Q	Q	V	D	.	V	G	Y	P	S	V	N	L	L	I	I	K	D	N	Q	I	V	Y	R	K	A	W	G	A	A	K	K	Y	D	G	S	V	L	M	E	Q	P	V	K	A	T	T	G	T	L	Y	D	L	A	S	N	T	K	M	Y	A	T	N	F	A	L	Q	K	L	M	S	E
Query Conservation														.
Alig confidence														.																	.										.	.	.	.	.	.	.																							.
Template Conservation																															.										.	.	.	.	.	.	.																							.
Template Sequence		Q	I	V	D	Q	Y	A	E	H	I	F	Y	N	S	G	A	V	G	X	A	L	V	V	I	D	N	N	Q	V	.	V	N	R	S	F	G	E	T	Q	.	.	.	.	.	.	.	P	G	N	N	I	R	P	R	P	D	S	L	I	R	I	A	S	I	T	K	L	X	.	T	S	E	I	X	V	K	L	A	D	D
Template Known Secondary structure															T	T		S									T	T			.								S	S	.	.	.	.	.	.	.	T	T							T	T		B				G	G	G					.											T
Template Predicted Secondary structure																															.										.	.	.	.	.	.	.																							.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80								.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	L	H	P	D	D	R	I	A	K	Y	I	P	G	F	A	D	S	P	N	D	T	I	K	G	K	N	T	L	R	I	S	D	L	L	H	H	S	G	G	F	P	A	D	P	Q	Y	P	N	K	A	V	A	G	A	L	Y	S	Q	D	K	G	Q	T	L	E	M	I	K	R	T	P	L	E	Y	Q	P	G	S
Query Conservation
Alig confidence																							.	.																																			.
Template Conservation																							.	.																																			.
Template Sequence		G	I	V	K	L	T	D	P	L	K	K	Y	A	P	K	G	V	N	V	P	S	.	.	Y	S	A	K	Q	P	I	R	L	L	H	L	A	S	H	T	S	G	L	P	R	E	Q	P	G	G	P	Q	K	R	P	V	F	T	.	W	P	T	K	D	N	R	W	Q	W	L	K	L	A	K	V	T	V	P	P	G	V
Template Known Secondary structure		T	S			T	T		B	G	G	G	G	S		T	T						.	.	S	S	T	T				B						T	T		S				S	S		S	S			S	S			T	T		.		S										T	T					S		T	T	S
Template Predicted Secondary structure																							.	.																																			.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	I	Y	S	D	V	D	Y	M	L	L	G	F	I	V	E	S	V	T	G	Q	P	L	D	R	Y	V	E	E	S	I	Y	R	P	L	G	L	T	H	T	V	F	N	P	L	L	K	G	F	K	P	Q	Q	I	A	A	T	E	L	N	G	N	T	R	D	G	V	I	H	F	P	N	I	R	T	S	T	L	W
Query Conservation
Alig confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	A	Y	S	N	L	A	Y	D	L	L	A	D	A	L	S	R	A	A	G	K	P	Y	A	H	L	L	R	D	K	I	T	A	P	L	G	X	K	N	T	T	L	T	P	T	A	E	Q	C	K	R	L	X	I	G	V	G	S	S	R	C	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																						T	S										T					T		T	T		B	S	S							T	T	B				T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.											.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Q	V	H	D	E	K	A	F	Y	S	M	G	G	V	S	G	H	A	G	L	F	S	N	T	G	D	I	A	V	L	M	Q	T	M	L	N	G	G	G	Y	G	D	V	Q	L	F	N	A	E	T	V	K	M	F	T	T	S	.	.	.	.	.	.	.	.	.	.	S	K	E	D	A	T	F	G	L	G	W	R
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	N	T	V	A	A	A	G	S	G	G	I	Y	S	T	P	E	D	X	Q	H	W	X	Q	Q	F	L	A	S	D	N	S	A	P	K	R	S	A	K	R	E	Q	A	L	Y	F	Q	R	G	D	L	V	S	L	K	G	X	D	V	A	G	Q	A	D	A	L	G	L	G	W	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.			G	G	G	T	T	T	T															T	T	S		B	T	T	B				T	T					T						G	G	G	S	S				S			T	T	S			S				S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	G	N	A	T	M	T	P	T	F	G	T	L	A	S	P	Q	T	Y	G	H	T	G	W	T	G	T	V	T	V	I	D	P	V	N	H	M	T	I	V	M	L	S	N	K	P	H	S	P	V	A	D	P	Q	K	N	P	N	M	F	E	S	G	Q	L	P	I	A	T	Y	G	W	V	V	D	Q	V	Y	A
Query Conservation
Alig confidence														.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	X	A	P	K	A	D	L	P	G	I	X	.	.	.	.	.	Q	K	T	G	G	G	G	G	F	I	T	Y	X	A	X	V	P	E	K	N	I	G	V	F	V	V	V	T	R	S	Q	L	T	K	F	S	N	X	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	N	Q	L	V	A	E
Template Known Secondary structure						B	T	T	B					.	.	.	.	.							T	T									G	G	G	T											T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.						.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.																.	.	.	.	380	.	.	.
		430	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		384	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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