Job Description P77619 Confidence 92.19% Date Thu Jan 5 12:31:10 GMT 2012 Rank 81 Aligned Residues 110 % Identity 15% Template c3fwlA_ PDB info PDB header:transferase, hydrolase Chain: A: PDB Molecule:penicillin-binding protein 1b; PDBTitle: crystal structure of the full-length transglycosylase pbp1b2 from escherichia coli Resolution 3.09 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.									.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.											.
Query SS confidence																					.	.	.	.	.	.	.	.											.
Query Sequence		F	N	V	E	R	L	N	Q	M	D	R	W	I	S	Q	Q	V	D	V	.	.	.	.	.	.	.	.	G	Y	P	S	V	N	L	L	I	I	.	K	D	N	Q	I	V	Y	R	K	A	W	G	A	A	K	K	Y	D	G	S	V	L	M	E	Q	P	V	K	A	T	T	G	T	L	Y	D	L	A	S	N	T	K
Query Conservation																					.	.	.	.	.	.	.	.											.
Alig confidence																					.	.	.	.	.	.	.	.											.							.	.									.	.	.	.	.	.
Template Conservation																																														.	.									.	.	.	.	.	.
Template Sequence		F	D	S	V	A	Q	D	A	A	E	K	A	A	V	E	G	I	P	A	L	K	K	Q	R	K	L	S	D	L	E	T	A	I	V	V	V	D	R	F	S	G	E	V	R	.	.	A	X	V	G	G	S	E	P	.	.	.	.	.	.	Q	F	A	G	Y	N	R	A	X	Q	A	R	R	S	I	G	S	L	A	K
Template Known Secondary structure																												S											T	T	T		B			.	.					S	S	S	S	.	.	.	.	.	.	T	T		S	S		T	T	T	S						G	G	G	G
Template Predicted Secondary structure																																														.	.									.	.	.	.	.	.
Template SS confidence
		442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.			.	.	.	.	490	.	.	.							.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130													.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	Y	A	T	N	F	A	L	Q	K	L	M	S	E	G	K	.	L	H	P	D	D	R	I	A	K	.	.	.	.	.	.	.	.	.	.	.	.	Y	I	P	G	F	A	D	S	P	N	D	T	I	K	G	K	N	T	L	R	I	S	D	L	L	H	H	S	G
Query Conservation																		.										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.					.										.	.	.	.	.	.	.	.	.	.	.	.					.	.	.
Template Conservation										.	.	.	.																															.	.	.
Template Sequence		P	A	T	Y	L	T	A	L	.	.	.	.	S	Q	P	K	I	Y	R	L	N	T	W	I	A	D	A	P	I	A	L	R	Q	P	N	G	Q	V	W	S	P	Q	.	.	.	N	D	D	R	R	Y	S	E	S	G	R	V	X	L	V	D	A	L	T	R	S	X
Template Known Secondary structure										.	.	.	.	T	S		S	S			T	T													S	S	S							.	.	.		T	T					T	T	S										T	T
Template Predicted Secondary structure										.	.	.	.																															.	.	.
Template SS confidence
		514	.	.	.	.	.	520	.					.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.				.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions