Job Description P77619 Confidence 100.00% Date Thu Jan 5 12:31:10 GMT 2012 Rank 10 Aligned Residues 332 % Identity 20% Template c2wzzA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-lactamase; PDBTitle: amp-c beta-lactamase (pseudomonas aeruginosa)in complex2 with compound m-03 Resolution 1.57 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		V	E	R	L	N	Q	M	D	R	W	I	S	Q	Q	V	D	.	V	G	Y	P	S	V	N	L	L	I	I	K	D	N	Q	I	V	Y	R	K	A	W	G	A	A	K	K	Y	D	G	S	V	L	M	E	Q	P	V	K	A	T	T	G	T	L	Y	D	L	A	S	N	T	K	M	Y	A	T	N	F	A	L	Q	K
Query Conservation																		.
Alig confidence																		.																				.							.	.	.	.	.	.	.																							.
Template Conservation																																						.							.	.	.	.	.	.	.																							.
Template Sequence		D	R	L	K	A	L	V	D	A	A	V	Q	P	V	M	K	A	N	D	I	P	G	L	A	V	A	I	S	L	K	G	E	P	H	Y	F	.	S	Y	G	L	A	S	.	.	.	.	.	.	.	K	E	D	G	R	R	V	T	P	E	T	L	F	E	I	G	S	V	S	K	T	F	.	T	A	T	L	A	G	Y
Template Known Secondary structure																			T	T		S									T	T						.				B	S		.	.	.	.	.	.	.	T	T	T			B			T	T						G	G	G					.
Template Predicted Secondary structure																																						.							.	.	.	.	.	.	.																							.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.								.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	S	E	G	K	L	H	P	D	D	R	I	A	K	Y	I	P	G	F	A	D	S	P	N	D	T	I	K	G	K	N	T	L	R	I	S	D	L	L	H	H	S	G	G	F	P	A	D	P	Q	Y	P	N	K	A	V	A	G	A	L	Y	S	Q	D	K	G	Q	T	L	E	M	I	K	R	T	P	L	E	Y
Query Conservation
Alig confidence																							.	.	.	.	.	.																															.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.																															.	.	.	.	.	.	.
Template Sequence		A	L	T	Q	D	K	M	R	L	D	D	R	A	S	Q	H	W	P	A	L	Q	.	.	.	.	.	.	G	S	R	F	D	G	I	S	L	L	D	L	A	T	Y	T	A	G	G	L	P	L	Q	F	P	D	S	V	Q	K	.	.	.	.	.	.	.	D	Q	A	Q	I	R	D	Y	Y	R	Q	W	Q	P	T	Y
Template Known Secondary structure					T	T	S			T	T	S	B	G	G	G	G		G	G	G	T	.	.	.	.	.	.	T	S	G	G	G	G		B						T	T		S	S				S	S			T	T			S	.	.	.	.	.	.	.															S	S
Template Predicted Secondary structure																							.	.	.	.	.	.																															.	.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.							.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.								.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	G	S	K	H	I	Y	S	D	V	D	Y	M	L	L	G	F	I	V	E	S	V	T	G	Q	P	L	D	R	Y	V	E	E	S	I	Y	R	P	L	G	L	T	H	T	V	F	N	P	L	L	K	G	F	K	P	Q	Q	I	A	A	T	E	L	N	G	N	T	R	D	G	V	I	H	F	P	N	I	R	T
Query Conservation
Alig confidence																																																																															.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		A	P	G	S	Q	R	L	Y	S	N	P	S	I	G	L	F	G	Y	L	A	A	R	S	L	G	Q	P	F	E	R	L	M	E	Q	Q	V	F	P	A	L	G	L	E	Q	T	H	L	D	V	P	E	A	A	L	A	Q	Y	A	Q	G	Y	G	K	D	D	R	P	L	R	V	G	P	G	P	L	D	A	.	.	.
Template Known Secondary structure			T	T	T																				T	T	S									T					T	T		S	S			S	S			G	G	G	G	G	G	B				B		G	G	G		B							T	T			.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	L	W	G	Q	V	H	D	E	K	A	F	Y	S	M	G	G	V	S	G	H	A	G	L	F	S	N	T	G	D	I	A	V	L	M	Q	T	M	L	N	G	G	G	Y	G	D	V	Q	L	F	N	A	E	T	V	K	M	F	T	T	S	S	K	E	D	A	T	F	G	L	G	W	R	V	N	G	N	A	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	Y	G	V	K	T	S	A	A	D	L	L	R	F	V	D	A	N	L	H	P	E	R	L	D	R	P	W	A	Q	A	L	D	A	T	H	R	G	Y	Y	K	V	G	D	M	T	.	Q	G	L	G	W	E	A	Y	D	W	P	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						G	G	G	S										T	T	S							T	T			.			S	S						S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.
Template SS confidence
																						247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.
																							356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.				.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	T	P	T	F	G	T	L	A	S	P	Q	T	Y	G	H	T	G	W	T	.	.	.	G	T	V	T	V	I	D	P	V	N	H	M	T	I	V	M	L	S	N	K	P	H	S	P	V	A	D	P	Q	K	N	P	N	M	F	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	K	R	L	Q	A	G	N	S	T	P	M	A	L	Q	P	H	R	I	A	R	L	P	A	P	Q	A	L	E	G	Q	R	L	L	N	K	T	G	S	T	N	G	F	G	A	Y	V	A	F	V	P	G	R	D	L	G	L	V	I	L	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	S						S															S	S										S	S									G	G	G	T								S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	Q	L	P	I	A	T	Y	G	W	V	V	D	Q	V	Y	A	A	L	K
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	R	N	Y	P	N	A	E	R	V	K	I	A	Y	A	I	L	S	G	L	E
Template Known Secondary structure		.	B
Template Predicted Secondary structure		.
Template SS confidence
			369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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