Job Description P77619 Confidence 94.83% Date Thu Jan 5 12:31:10 GMT 2012 Rank 71 Aligned Residues 118 % Identity 11% Template c2wadB_ PDB info PDB header:peptide binding protein Chain: B: PDB Molecule:penicillin-binding protein 2b; PDBTitle: penicillin-binding protein 2b (pbp-2b) from streptococcus2 pneumoniae (strain 5204) Resolution 2.18 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.									.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.													.	.
Query SS confidence																				.	.	.	.	.	.	.	.													.	.
Query Sequence		F	N	V	E	R	L	N	Q	M	D	R	W	I	S	Q	Q	V	D	.	.	.	.	.	.	.	.	V	G	Y	P	S	V	N	L	L	I	I	K	.	.	D	N	Q	I	V	Y	R	K	A	W	G	A	A	K	K	Y	D	G	S	V	L	M	E	Q	P	V	K	A	T	T	G	T	L	Y	D	L	A	S	N	T
Query Conservation																				.	.	.	.	.	.	.	.													.	.
Alig confidence																				.	.	.	.	.	.	.	.													.	.																			.	.	.
Template Conservation																																																												.	.	.
Template Sequence		I	D	L	A	F	Q	D	S	V	D	A	L	L	K	S	Y	F	N	S	E	L	G	N	G	G	A	K	Y	S	E	G	V	Y	A	V	A	L	N	P	Q	T	G	A	V	L	S	M	S	G	L	K	H	D	L	K	T	G	E	.	.	.	L	T	P	D	S	L	G	T	V	T	N	V	F	V	P	G	S	V	V
Template Known Secondary structure																									S	T	T	T	T											T	T	T		B											T	T	T			.	.	.					T	T							B			G	G	G	G
Template Predicted Secondary structure																																																												.	.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.				370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.
Query SS confidence																																													.	.	.	.	.
Query Sequence		K	M	Y	A	T	N	F	A	L	Q	K	L	M	S	E	G	K	L	H	P	D	D	R	I	A	K	Y	I	P	G	F	A	D	S	P	N	D	T	I	K	G	K	N	.	.	.	.	.	T	L	R	I	S	D	L	L	H	H	S	G
Query Conservation																																													.	.	.	.	.
Alig confidence											.	.	.	.																															.	.	.	.	.
Template Conservation											.	.	.	.
Template Sequence		K	A	A	T	I	S	S	G	W	.	.	.	.	E	N	G	V	L	S	G	N	Q	T	L	T	D	Q	P	I	V	F	Q	G	S	A	P	I	Y	S	W	Y	K	L	A	Y	G	S	F	P	I	T	A	V	E	A	L	E	Y	S	S
Template Known Secondary structure											.	.	.	.		T	T	S			S	S								B		B	T	T	S			B			T	T	T	T	T	T		S												T
Template Predicted Secondary structure											.	.	.	.
Template SS confidence
		389	390	.	.	.	.	.	.	.					.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions