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Job DescriptionP77619
Confidence99.23%DateThu Jan 5 12:31:10 GMT 2012
Rank28Aligned Residues252
% Identity19%Templatec2ov5A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:carbapenemase; PDBTitle: crystal structure of the kpc-2 carbapenemase
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80.........90.........100.........110.........120
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Query Sequence  NQMDRWISQQVDVGYPSVNLLIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLASNTKMYATNFALQKLMSEG
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Template Sequence  EPFAKLEQDF. . GGSIGVYAMDTGSGATV. . . . . . . . . . . . . . . . . . . . . SYRAEERFPLCSSFKGF. LAAAVLARSQQQ
Template Known Secondary structure  ..TSTTT

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   31........40 .........50....... ..60.........70.... .....80......
 
   121....... .130.........140.........150.........160.........170.........180.........190......
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Query Sequence  KLHPDDRI. . . . AKYIPGFADSPNDTIKGKNTLRISDLLHHSGGFPADPQYPNKAVAGALYSQDKGQTLEMIKRTPLEYQ
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Template Sequence  AGLLDTPIRYGKNALVPW. . . SPISEKYLTTGMTVAELSA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTSTT



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   88.90.........100..... ....110.........120....
 
   197..200.........210.........220.........230.........240.........250.........260.........270......
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Query Sequence  PGSKHIYSDVDYMLLGFIVESVTGQPLDRYVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTS
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Template Sequence  . AAVQYSDNAAANLLLKEL. . . . . . GGPAGLTAFM. RSIGDTTFRLDRWELELNSAIP. . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  .S

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   125....130.........140.. .......150.. .......160.........170....
 
   277..280.........290.........300.........310.........320.........330.........340.........350......
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Query Sequence  TLWGQVHDEKAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGDVQLFNAETVKMFTTSSKEDATFGLGWRVNGNATM
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Template Sequence  . . . . . . . . . . . . . . . . . . . GDARDTSSPRAVTESLQKLTLG. . . . . . SALAAPQRQQFVDWLKGNTTGNHRIRAAVPADW
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   175....180.........190...... ...200.........210.........220.........
 
   357..360.........370.........380...... ...390.........400.........410.........420.........430.
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Query Sequence  TPTFGTLASPQTYGHTGWTGTVTVIDPVNH. . MTIVMLSNKPHSPVADPQKNPNMFESGQLPIATYGWVVDQVYAAL
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Template Sequence  AVGDKT. . . . GTCGVYGTANDYAVVWPTGRAPIVLAVYTRAPNKDDKHSEAVIA. . . . . . . . . . . . . AAARLALEGL
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   230..... ....240.........250.........260.........270......... 280.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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