Job Description P77619 Confidence 93.40% Date Thu Jan 5 12:31:10 GMT 2012 Rank 75 Aligned Residues 114 % Identity 16% Template c2jciA_ PDB info PDB header:drug-binding protein Chain: A: PDB Molecule:penicillin-binding protein 1b; PDBTitle: structural insights into the catalytic mechanism and the2 role of streptococcus pneumoniae pbp1b Resolution 2.5 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.						.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.														.	.
Query SS confidence																			.	.	.	.	.														.	.
Query Sequence		F	N	V	E	R	L	N	Q	M	D	R	W	I	S	Q	Q	V	.	.	.	.	.	D	V	G	Y	P	S	V	N	L	L	I	I	K	.	.	D	N	Q	I	V	Y	R	K	A	W	G	A	A	K	K	Y	D	G	S	V	L	M	E	Q	P	V	K	A	T	T	G	T	L	Y	D	L	A	S	N	T	K	M	Y
Query Conservation																			.	.	.	.	.														.	.
Alig confidence																			.	.	.	.	.														.	.						.	.									.	.	.	.	.	.
Template Conservation																																												.	.									.	.	.	.	.	.
Template Sequence		I	D	Q	K	I	H	S	A	M	Q	S	A	V	A	D	Y	G	Y	L	L	D	D	G	T	G	R	V	E	V	G	N	V	L	M	D	N	Q	T	G	A	I	L	.	.	G	F	V	G	G	R	N	Y	.	.	.	.	.	.	Q	E	N	Q	N	N	H	A	F	D	T	K	R	S	P	A	S	T	T	K	P	L
Template Known Secondary structure																		G	G	G	G			S	S	S											T	T	T		B			.	.						S		T	.	.	.	.	.	.	T	T					T	T	T	T			B			G	G	G	G
Template Predicted Secondary structure																																												.	.									.	.	.	.	.	.
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.			.	.	.	.	440	.	.	.							.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		A	T	N	F	A	L	Q	K	L	M	S	E	G	K	L	H	P	D	D	R	I	A	K	.	.	.	Y	I	P	G	F	A	D	S	P	N	D	T	I	K	G	K	N	T	L	R	I	S	D	L	L	H	H	S	G
Query Conservation																									.	.	.
Alig confidence		.	.	.																					.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	L	A	Y	G	I	A	I	D	Q	G	L	M	G	S	E	T	I	L	S	N	Y	P	T	N	F	A	N	G	N	P	I	M	Y	A	N	S	K	G	T	G	M	M	T	L	G	E	A	L	N	Y	S	W
Template Known Secondary structure		.	.	.		T							T	T	S			T	T						S			B		T	T	S		B			B	T	T	B				S											T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions