Job Description P77619 Confidence 100.00% Date Thu Jan 5 12:31:10 GMT 2012 Rank 8 Aligned Residues 325 % Identity 18% Template c1ei5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:d-aminopeptidase; PDBTitle: crystal structure of a d-aminopeptidase from ochrobactrum2 anthropi Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		L	N	Q	M	D	R	W	I	S	Q	Q	V	D	.	V	G	Y	P	S	V	N	L	L	I	I	K	D	N	Q	I	V	Y	R	K	A	W	G	A	A	K	K	Y	D	G	S	V	L	M	E	Q	P	V	K	A	T	T	G	T	L	Y	D	L	A	S	N	T	K	M	Y	A	T	N	F	A	L	Q	K	L	M	S
Query Conservation															.
Alig confidence															.																											.	.	.	.	.	.	.																							.
Template Conservation																																										.	.	.	.	.	.	.																							.
Template Sequence		T	S	A	L	E	A	F	V	R	H	I	P	Q	N	Y	K	G	P	G	G	V	V	A	V	V	K	D	G	E	V	V	L	Q	H	A	W	G	F	A	D	.	.	.	.	.	.	.	L	R	T	R	T	P	M	T	L	D	T	R	M	P	I	C	S	V	S	K	Q	F	.	T	C	A	V	L	L	D	A	V	G
Template Known Secondary structure											T					S		S	S									T	T													.	.	.	.	.	.	.	T	T	T	T					T	T						G	G	G					.									T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.																							.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.								.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		E	G	K	L	H	P	D	D	R	I	A	K	Y	I	P	G	F	A	D	S	P	N	D	T	I	K	G	K	N	T	L	R	I	S	D	L	L	H	H	S	G	G	F	P	A	D	P	Q	Y	P	N	K	A	V	A	G	A	L	Y	S	Q	D	K	G	Q	T	L	E	M	I	K	R	T	P	.	L	E	Y	Q	P
Query Conservation																																																																												.
Alig confidence						.															.	.	.	.	.	.	.	.	.																																															.
Template Conservation						.															.	.	.	.	.	.	.	.	.
Template Sequence		E	P	E	L	.	L	D	D	A	L	E	A	Y	L	D	K	F	E	D	.	.	.	.	.	.	.	.	.	E	R	P	A	V	R	D	L	C	N	N	Q	S	G	L	R	D	Y	W	A	L	S	V	L	C	G	A	D	P	E	G	V	F	L	P	A	Q	A	Q	S	L	L	R	R	L	K	T	T	H	F	E	P
Template Known Secondary structure		S	G	G	G	.	G								T	T	T			S	.	.	.	.	.	.	.	.	.										T	T		S												T	T			T	T			B											T					S	S		T
Template Predicted Secondary structure						.															.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.										.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	K	H	I	Y	S	D	V	D	Y	M	L	L	G	F	I	V	E	S	V	T	G	Q	P	L	D	R	Y	V	E	E	S	I	Y	R	P	L	G	L	T	H	T	V	F	N	P	L	L	K	G	F	K	P	Q	Q	I	A	A	T	E	L	N	G	N	T	R	D	G	V	I	H	F	P	N	I	R	T	S	T
Query Conservation
Alig confidence																																																								.	.	.																				.	.	.	.
Template Conservation																																																								.	.	.																				.	.	.	.
Template Sequence		G	S	H	Y	S	Y	C	N	G	N	F	R	I	L	A	D	L	I	E	A	H	T	G	R	T	L	V	D	I	L	S	E	R	I	F	A	P	A	G	M	K	R	A	E	L	I	S	D	T	A	L	F	D	E	.	.	.	C	T	G	Y	E	G	D	T	V	R	G	F	L	P	A	T	N	R	I	.	.	.	.
Template Known Secondary structure		T	S	S																				T	S										T					T		T	T						B	G	G	G			S	.	.	.	S							T	T	T									B	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.																				.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.				.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.					.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure																																																																			.	.	.	.
Query SS confidence																																																																			.	.	.	.
Query Sequence		L	W	G	Q	V	H	D	E	K	A	F	Y	S	M	G	G	V	S	G	H	A	G	L	F	S	N	T	G	D	I	A	V	L	M	Q	T	M	L	N	G	G	G	Y	G	D	V	Q	L	F	N	A	E	T	V	K	M	F	T	T	S	S	K	E	D	A	.	.	.	.	T	F	G	L	G	W	R	V	N	G	N
Query Conservation																																																																			.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.																				.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	W	M	G	D	A	G	I	C	A	S	L	N	D	M	I	A	W	E	Q	F	I	D	A	T	.	.	.	.	.	.	R	D	D	E	S	G	L	Y	R	R	L	S	G	P	Q	T	F	K	D	G	V	A	A	P	Y	G	F	G	L	N	L	H	E	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B			S	S	S																			T	.	.	.	.	.	.	T	T		T	T	S						S	S			B		T	T	S		B		S			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template SS confidence
																	221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.							.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	M	T	P	T	F	G	T	L	A	S	P	Q	T	Y	G	H	T	G	W	T	G	T	V	T	V	I	D	P	V	N	H	M	T	I	V	M	L	S	N	K	P	H	S	P	V	A	D	P	Q	K	N	P	N	M	F	E	S	G	Q	L	P	I
Query Conservation
Alig confidence											.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.
Template Sequence		G	G	K	R	L	T	G	H	G	.	.	.	.	.	.	.	G	A	L	R	G	W	R	C	Q	R	W	H	C	A	D	E	R	L	S	T	I	A	M	F	N	F	E	G	G	A	S	E	V	A	F	K	L	M	N	I	A	L	G	V	S	S	S	E
Template Known Secondary structure		T	T								.	.	.	.	.	.	.				T	T									G	G	G	T								S	B	S	S															T
Template Predicted Secondary structure											.	.	.	.	.	.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.								.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions