Job Description P12996 Confidence 45.39% Date Thu Jan 5 11:33:15 GMT 2012 Rank 356 Aligned Residues 188 % Identity 13% Template d2tpsa_ SCOP info TIM beta/alpha-barrel Thiamin phosphate synthase Thiamin phosphate synthase Resolution 1.25

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.					.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.
Query SS confidence																																																			.	.	.	.
Query Sequence		R	L	M	E	V	E	Q	V	L	E	S	A	R	K	A	K	A	A	G	S	T	R	F	C	M	G	A	A	W	K	N	P	H	E	R	D	M	P	Y	L	E	Q	M	V	Q	G	V	K	A	.	.	.	.	M	G	L	E	A	C	M	T	L	G	T	L	S	E	S	Q	A	Q	R	L	A	N	A	G	L	D	Y
Query Conservation																																																			.	.	.	.
Alig confidence																												.	.																						.	.	.	.									.	.	.	.	.	.
Template Conservation																												.	.																																		.	.	.	.	.	.
Template Sequence		S	N	N	T	K	A	D	P	V	T	V	V	Q	K	A	L	K	G	G	A	T	L	Y	Q	F	R	.	.	E	K	G	G	D	A	L	T	G	E	A	R	I	K	F	A	E	K	A	Q	A	A	C	R	E	A	G	V	P	F	I	V	N	.	.	.	.	.	.	D	D	V	E	L	A	L	N	L	K	A	D	G
Template Known Secondary structure		G	G	G		S	S													T		S						.	.			S	T	T																						T							.	.	.	.	.	.	S									T		S
Template Predicted Secondary structure																												.	.																																		.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.							.	.	.	.	.	.	.	100	.	.	.	.	.
		150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure									.																																								.
Query SS confidence									.																																								.
Query Sequence		Y	N	H	N	L	D	T	.	S	P	E	F	Y	G	N	I	I	T	T	R	T	Y	Q	E	R	L	D	T	L	E	K	V	R	D	A	G	I	K	V	C	S	G	G	I	V	G	L	.	G	E	T	V	K	D	R	A	G	L	L	L	Q	L	A	N	L	P	T	P	P	E	S	V	P	I	N	M	L	V	K	V
Query Conservation									.																																								.
Alig confidence									.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.										.	.	.	.							.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.							.	.
Template Sequence		I	H	I	G	Q	E	D	A	N	A	K	E	V	R	A	A	I	G	D	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	G	V	S	A	H	T	M	S	E	V	K	Q	.	.	.	.	A	E	E	D	G	A	.	.	D	Y	V	G	L	G	P	I	Y	P	T
Template Known Secondary structure						T	T	S	S										T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S							.	.	.	.					T		.	.	S							S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.							.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.																								.	.	.	.	130	.	.	.	.	.	.	.	.	.					140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	T	P	L	A	D	N	D	D	V	D	A	F	D	F	I	R	T	I	A	V	A	R	I	M	M	P	T	S	Y	V	R	L	S	A	G	R	E	Q	M	N	E	Q	T	Q	A	M	C	F	M	A	G	A	N	S	I	F	Y	G	C	K	L	L	T	T	P	N	P	E	E	D	K	D	L	Q	L	F	R	K
Query Conservation
Alig confidence															.	.	.	.	.																					.	.	.																				.								.
Template Conservation															.	.	.	.	.																					.	.	.																				.								.
Template Sequence		E	T	K	K	D	T	R	A	V	Q	G	V	S	.	.	.	.	.	L	I	E	A	V	R	R	Q	G	I	S	I	P	I	V	G	I	G	G	I	.	.	.	T	I	D	N	A	A	P	V	I	Q	A	G	A	D	G	V	S	M	I	.	S	A	I	S	Q	A	E	.	D	P	E	S	A	A	R	K	F	R	E
Template Known Secondary structure			S	S	S	S						T	T		.	.	.	.	.								T	T									S	S		.	.	.		T	T	T	S						T	T		S					S	.					T	S	S	.
Template Predicted Secondary structure															.	.	.	.	.																					.	.	.																				.								.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.						170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.
		308
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		227

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions